Pairwise Alignments

Query, 1026 a.a., Multidrug transporter MdtC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 1040 a.a., Cation/multidrug efflux pump from Enterobacter asburiae PDN3

 Score =  951 bits (2458), Expect = 0.0
 Identities = 502/1013 (49%), Positives = 692/1013 (68%), Gaps = 5/1013 (0%)

Query: 6    LFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMASSVAT 65
            LFI RPVAT L+  AI L GI+G+R LPV+ LP+VD+P I V    PGASP+ + S++  
Sbjct: 15   LFILRPVATTLLMVAILLAGIIGYRFLPVSALPEVDYPTIQVVTLYPGASPDVVTSAITA 74

Query: 66   PLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLPGGMPS 125
            PLER  G+++G+ +M+S SS G++ + L+F     ++ A ++VQAAINAA +LLP  +P+
Sbjct: 75   PLERQFGQMSGLKQMSSQSSGGASVVTLQFQLTLSLDVAEQEVQAAINAATNLLPSDLPN 134

Query: 126  RPTYRKANPSDAPIMILTLTSESWSQGKLYDFASTQLAQTIAQIDGVGDVDVGGSSLPAV 185
             P Y K NP+D PIM L +TS +    ++ D   T++AQ I+Q+ GVG V + G   PAV
Sbjct: 135  PPVYSKVNPADPPIMTLAVTSSAMPMTQVEDMVETRVAQKISQVSGVGLVTLAGGQRPAV 194

Query: 186  RVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIEDSVHRWQIQTNDELKTAAEYQPLI 245
            RV LN QA+   G++ + +R AI SANV   +G+++       +  ND++++A EY+ LI
Sbjct: 195  RVKLNAQAIAALGLTSETIRTAISSANVNSAKGSLDGPTRAVTLSANDQMQSADEYRQLI 254

Query: 246  IHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGIRAKLP 305
            I Y NGA VRLGDVA+V    ++       N + AI++ +++ P ANII+T D IR  LP
Sbjct: 255  IAYQNGAPVRLGDVATVEQGAENSWLGAWANRQQAIVMNVQRQPGANIIETADSIRTMLP 314

Query: 306  ELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATLIPAVA 365
            +L   +P ++ +++  DR+  IRAS+ + +  L +++ALV+++++LFLR+  AT+IPAVA
Sbjct: 315  QLIESLPKSVSVKVLSDRTTNIRASVTDTQFELMLAIALVVMIIYLFLRNVPATIIPAVA 374

Query: 366  VPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKPLQAAL 425
            VP+SL+GTFA M    FS+NNL+LMALTIATGFVVDDAIVV+ENI+R++E G KPL AAL
Sbjct: 375  VPLSLVGTFAVMVFLDFSINNLTLMALTIATGFVVDDAIVVIENISRYIEKGEKPLAAAL 434

Query: 426  QGTREVGFTVISMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVVSLTLTPMM 485
            +G  E+GFT+IS++ SL+AV +PLL MG + GRL REFAVTL+VAI IS VVSLTLTPMM
Sbjct: 435  KGAGEIGFTIISLTFSLIAVLIPLLFMGDIVGRLFREFAVTLAVAILISAVVSLTLTPMM 494

Query: 486  CGWMLKSSKPRTQPR-KRGVGRLLVALQQGYGTSLKWVLNHTRLVGVVFLGTVALNIWLY 544
            C  ML     R Q R  R   R+   +   YG  L  VLNH      V LGT+AL++ L+
Sbjct: 495  CARMLSHESLRKQNRFSRASERMFERIIAAYGRVLAKVLNHPWATLGVALGTLALSVMLW 554

Query: 545  IAIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTG---- 600
            I IPK FFP QD G++ G +QA QS+SF +M  + Q   +I+  DPAV ++T + G    
Sbjct: 555  IFIPKGFFPIQDNGIIQGTLQAPQSVSFASMAQRQQQVSEIVMKDPAVESLTSYVGVDGT 614

Query: 601  GSRVNSGMMFITLKPRGERKETAQQIIDRLRVKLAKEPGARLFLMAVQDIRVGGRQANAS 660
               +NS  + I LKP  ER +    +I+RL+  +A  PG  L+L  +QD+ +  + +   
Sbjct: 615  NPSLNSARLQINLKPLDERDDRVNAVIERLQNAVAHVPGVELYLQPIQDLTIDTQVSRTQ 674

Query: 661  YQYTLLSDSLAALREWEPKIRKALSALPQLADVNSDQQDNGAEMNLIYDRDTMSRLGIDV 720
            YQ+TL + SL AL  W P++   L+ LPQLADV+SD QD G    +  +RDT SRLGI +
Sbjct: 675  YQFTLQATSLDALSTWVPQLVNKLNTLPQLADVSSDWQDKGLAAYVNVNRDTASRLGITM 734

Query: 721  QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYSQDISALEKMFVINRDGKAIPLSY 780
               ++ L NAFGQR ISTIY   NQY+VV+E +   +  ++AL+ + +  +DG  +PLS 
Sbjct: 735  SDVDNALYNAFGQRLISTIYTQANQYRVVLEHNTENTPGLAALDSVRLTGKDGGIVPLSA 794

Query: 781  FAQWRPANAPLSVNHQGLSAASTIAFNLPTGTSLSQATEAINRTMTQLGVPSTVRGSFSG 840
             A       PLS+NH     ++TI+FN+P   SL +A EAI     +L  PS ++  F G
Sbjct: 795  IATVEERYTPLSINHLDQFPSTTISFNVPDNYSLGEAVEAIQAAEKELSFPSDIQTQFQG 854

Query: 841  TAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNA 900
            +   FQ  + + + LIVAA+  +YIVLG+LYES++HP+TILSTLP+AGVGALLAL L  +
Sbjct: 855  STLAFQAALGNTIWLIVAAVVAMYIVLGVLYESFIHPITILSTLPTAGVGALLALMLAGS 914

Query: 901  PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAIFQACLLRFRPIMMTTLA 960
               +IA+IGI+LLIGIVKKNAIMM+DFAL A+R  G++P  AIFQACLLRFRPI+MTTLA
Sbjct: 915  ELDVIAIIGIILLIGIVKKNAIMMIDFALAAEREQGMSPRDAIFQACLLRFRPILMTTLA 974

Query: 961  ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRL 1013
            AL GALPL+LS G G+ELR+PLGI +VGGL++SQ+LTL+TTPV+YL FDRL L
Sbjct: 975  ALLGALPLMLSTGVGAELRRPLGIGMVGGLLVSQVLTLFTTPVIYLLFDRLAL 1027