Pairwise Alignments

Query, 1026 a.a., Multidrug transporter MdtC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 1025 a.a., Multidrug resistance protein MdtC from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 1821 bits (4718), Expect = 0.0
 Identities = 939/1025 (91%), Positives = 988/1025 (96%)

Query: 1    MRFFALFIYRPVATILIAAAITLCGILGFRLLPVAPLPQVDFPVIMVSASLPGASPETMA 60
            M+FFALFIYRPVATIL++ AITLCGILGFR+LPVAPLPQVDFPVIMVSASLPGASPETMA
Sbjct: 1    MKFFALFIYRPVATILLSVAITLCGILGFRMLPVAPLPQVDFPVIMVSASLPGASPETMA 60

Query: 61   SSVATPLERSLGRIAGVNEMTSSSSLGSTRIILEFNFDRDINGAARDVQAAINAAQSLLP 120
            SSVATPLERSLGRIAGV+EMTSSSSLGSTRIIL+F+FDRDINGAARDVQAAINAAQSLLP
Sbjct: 61   SSVATPLERSLGRIAGVSEMTSSSSLGSTRIILQFDFDRDINGAARDVQAAINAAQSLLP 120

Query: 121  GGMPSRPTYRKANPSDAPIMILTLTSESWSQGKLYDFASTQLAQTIAQIDGVGDVDVGGS 180
             GMPSRPTYRKANPSDAPIMILTLTS+++SQG+LYDFASTQLA TI+QIDGVGDVDVGGS
Sbjct: 121  SGMPSRPTYRKANPSDAPIMILTLTSDTYSQGELYDFASTQLAPTISQIDGVGDVDVGGS 180

Query: 181  SLPAVRVGLNPQALFNQGVSLDEVREAIDSANVRRPQGAIEDSVHRWQIQTNDELKTAAE 240
            SLPAVRVGLNPQALFNQGVSLD+VR A+ +ANVR+PQGA+ED  HRWQIQTNDELKTAAE
Sbjct: 181  SLPAVRVGLNPQALFNQGVSLDDVRTAVSNANVRKPQGALEDGTHRWQIQTNDELKTAAE 240

Query: 241  YQPLIIHYNNGAAVRLGDVASVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDGI 300
            YQPLIIHYNNG AVRLGDVA+VTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVD I
Sbjct: 241  YQPLIIHYNNGGAVRLGDVATVTDSVQDVRNAGMTNAKPAILLMIRKLPEANIIQTVDSI 300

Query: 301  RAKLPELRAMIPAAIDLQIAQDRSPTIRASLQEVEETLAISVALVILVVFLFLRSGRATL 360
            RAKLPEL+  IPAAIDLQIAQDRSPTIRASL+EVE+TL ISVALVILVVFLFLRSGRAT+
Sbjct: 301  RAKLPELQETIPAAIDLQIAQDRSPTIRASLEEVEQTLIISVALVILVVFLFLRSGRATI 360

Query: 361  IPAVAVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP 420
            IPAV+VPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP
Sbjct: 361  IPAVSVPVSLIGTFAAMYLCGFSLNNLSLMALTIATGFVVDDAIVVLENIARHLEAGMKP 420

Query: 421  LQAALQGTREVGFTVISMSLSLVAVFLPLLLMGGLPGRLLREFAVTLSVAIGISLVVSLT 480
            LQAALQGTREVGFTV+SMSLSLVAVFLPLLLMGGLPGRLLREF VTLSVAIGISL+VSLT
Sbjct: 421  LQAALQGTREVGFTVLSMSLSLVAVFLPLLLMGGLPGRLLREFTVTLSVAIGISLLVSLT 480

Query: 481  LTPMMCGWMLKSSKPRTQPRKRGVGRLLVALQQGYGTSLKWVLNHTRLVGVVFLGTVALN 540
            LTPMMCGWMLK+SKPR Q R RG GR+LVALQQGYG SLKWVLNHTRLVGVV LGT+ALN
Sbjct: 481  LTPMMCGWMLKASKPREQKRLRGFGRMLVALQQGYGKSLKWVLNHTRLVGVVLLGTIALN 540

Query: 541  IWLYIAIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVNNVTGFTG 600
            IWLYI+IPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAV+NVTGFTG
Sbjct: 541  IWLYISIPKTFFPEQDTGVLMGGIQADQSISFQAMRGKLQDFMKIIRDDPAVDNVTGFTG 600

Query: 601  GSRVNSGMMFITLKPRGERKETAQQIIDRLRVKLAKEPGARLFLMAVQDIRVGGRQANAS 660
            GSRVNSGMMFITLKPR ER ETAQQIIDRLRVKLAKEPGA LFLMAVQDIRVGGRQ+NAS
Sbjct: 601  GSRVNSGMMFITLKPRDERSETAQQIIDRLRVKLAKEPGANLFLMAVQDIRVGGRQSNAS 660

Query: 661  YQYTLLSDSLAALREWEPKIRKALSALPQLADVNSDQQDNGAEMNLIYDRDTMSRLGIDV 720
            YQYTLLSD LAALREWEPKIRK L+ LP+LADVNSDQQDNGAEMNL+YDRDTM+RLGIDV
Sbjct: 661  YQYTLLSDDLAALREWEPKIRKKLATLPELADVNSDQQDNGAEMNLVYDRDTMARLGIDV 720

Query: 721  QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYSQDISALEKMFVINRDGKAIPLSY 780
            QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRY+QDISALEKMFVIN +GKAIPLSY
Sbjct: 721  QAANSLLNNAFGQRQISTIYQPMNQYKVVMEVDPRYTQDISALEKMFVINNEGKAIPLSY 780

Query: 781  FAQWRPANAPLSVNHQGLSAASTIAFNLPTGTSLSQATEAINRTMTQLGVPSTVRGSFSG 840
            FA+W+PANAPLSVNHQGLSAASTI+FNLPTG SLS A+ AI+R MTQLGVPSTVRGSF+G
Sbjct: 781  FAKWQPANAPLSVNHQGLSAASTISFNLPTGKSLSDASAAIDRAMTQLGVPSTVRGSFAG 840

Query: 841  TAQVFQQTMNSQLILIVAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNA 900
            TAQVFQ+TMNSQ+ILI+AAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNA
Sbjct: 841  TAQVFQETMNSQVILIIAAIATVYIVLGILYESYVHPLTILSTLPSAGVGALLALELFNA 900

Query: 901  PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRSGGLTPEQAIFQACLLRFRPIMMTTLA 960
            PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQR G LTP++AIFQACLLRFRPIMMTTLA
Sbjct: 901  PFSLIALIGIMLLIGIVKKNAIMMVDFALEAQRHGNLTPQEAIFQACLLRFRPIMMTTLA 960

Query: 961  ALFGALPLVLSGGDGSELRQPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKNS 1020
            ALFGALPLVLSGGDGSELR PLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRK  
Sbjct: 961  ALFGALPLVLSGGDGSELRHPLGITIVGGLVMSQLLTLYTTPVVYLFFDRLRLRFSRKPK 1020

Query: 1021 KPVVE 1025
            + V E
Sbjct: 1021 QTVTE 1025