Pairwise Alignments

Query, 302 a.a., Putative transcriptional regulator from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 323 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  136 bits (343), Expect = 6e-37
 Identities = 90/300 (30%), Positives = 146/300 (48%), Gaps = 5/300 (1%)

Query: 3   NWAQKLKLHHLQTLVALGEQGNLTHVARMMNISQPALSKWLSQLEDEIGITLFERHSKGL 62
           NW   ++  HL  +  L    N+   A  MN+SQPALSK L  LE++ G  LFER  + +
Sbjct: 12  NW---IRYKHLVLIDTLARTRNMHATATRMNLSQPALSKMLRDLEEQFGFALFERLPRSM 68

Query: 63  RPSEGGKLLLQHAQRLINDLERSQYEIARFKQGGLVGSLKIGCSPVATDCV-SQAILSLL 121
            P+E G+ ++++AQ  + + ++   ++ R + GG  G +++G    AT  V  QAI ++ 
Sbjct: 69  PPTELGEYVVRYAQGALAESQQFVDQVNRLRNGGH-GFIRVGGIFAATALVLPQAIAAIK 127

Query: 122 NEMPTLHLNIEEKVMTPLLHDLLAGQVDVVVGRVGGRALQLPLNYQVLYTEPVCFVARPH 181
              P L + + E     LL  L   ++D+++GR          ++Q L  EP   V    
Sbjct: 128 ARSPLLSIEVVEHSSDHLLTMLEQNKLDIMIGRFTEERFGQLFDFQPLEPEPFSLVVNSE 187

Query: 182 HPLAARAQIAWSDLAHWRWIVWPTGTPIRISIDNALVDNGVMLPENTIESASMNVSTNLL 241
           HPL          L  W W+++P GTPIR  ++ A    G+  P + +E+ SM +   LL
Sbjct: 188 HPLNQLDNTPLEALGDWPWVLYPVGTPIRNRLEQAFRVAGIATPADCVETISMPMFLQLL 247

Query: 242 QSSDMISILSLRLAQRYASQGQLAILNLPKIEQKGSVGMFWRKNETPSLALSRFLYFLAQ 301
           QS+ MI++L   +     + GQ   L  P        G+  RK+E  S +   F+  L +
Sbjct: 248 QSAPMIAMLPRSMVAAQLASGQFKELRSPLQVPALEYGVVTRKDEPLSASARAFVEILLE 307