Pairwise Alignments

Query, 586 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 586 a.a., Putative DNA repair helicase RadD from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 1147 bits (2966), Expect = 0.0
 Identities = 558/586 (95%), Positives = 574/586 (97%)

Query: 1   MIFTLRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKE 60
           MIFTLRPYQQEAVDATL+HFRRH+TPAVIVLPTGAGKSLVIAELAR+ARGRVLVLAHVKE
Sbjct: 1   MIFTLRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKE 60

Query: 61  LVAQNHAKYCALGLEADIFAAGLKRKESQGKVVFGSVQSVARNLDAFQEEFSLLIVDECH 120
           LVAQNHAKY ALGLEADIFAAGLKRKES  KVVFGSVQSVARNLDAFQ EFSLLIVDECH
Sbjct: 61  LVAQNHAKYQALGLEADIFAAGLKRKESHVKVVFGSVQSVARNLDAFQGEFSLLIVDECH 120

Query: 121 RIGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGNDNALFRD 180
           RIGDDE+SQYQQILTHL+KVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRG++ ALFRD
Sbjct: 121 RIGDDEESQYQQILTHLTKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGDEKALFRD 180

Query: 181 CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH 240
           CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH
Sbjct: 181 CIYELPLRYMIKHGYLTPPERLDMPVVQYDFSRLQAQSNGLFSEADLNRELKKQQRITPH 240

Query: 241 IISQIMEFAQTRKGVMIFAATVEHAKEIVGLLPADDAALITGDTPGPERDALIDNFKAQR 300
           IISQIMEFA TRKGVMIFAATVEHAKEIVGLLPA+DAALITGDTPG ERD LI+NFKAQR
Sbjct: 241 IISQIMEFAATRKGVMIFAATVEHAKEIVGLLPAEDAALITGDTPGAERDVLIENFKAQR 300

Query: 301 FRYLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP 360
           FRYLVNV+VLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP
Sbjct: 301 FRYLVNVAVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAPGKTDCLILDYAGNP 360

Query: 361 HDLYAPEVGSPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG 420
           HDLYAPEVG+PKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG
Sbjct: 361 HDLYAPEVGTPKGKSDNVPVQVFCPACGFANTFWGKTTADGTLIEHFGRRCQGWFEDDDG 420

Query: 421 HREQCDFRFRFKNCPQCNAENDIAARRCRECDAILVDPDDMLKAALRLKDALVLRCSGMT 480
           HREQCDFRFRFKNCPQCNAENDIAARRCRECD +LVDPDDMLKAALRLKDALVLRCSGM+
Sbjct: 421 HREQCDFRFRFKNCPQCNAENDIAARRCRECDTVLVDPDDMLKAALRLKDALVLRCSGMS 480

Query: 481 MQHGQDEKGEWLKITYYDEDGADVSERFRLHTPAQRTAFEQLFIRPHTRTPGVPLRWITA 540
           +QHG DEKGEWLKITYYDEDGADVSERFRL TPAQRTAFEQLFIRPHTRTPG+PLRWITA
Sbjct: 481 LQHGHDEKGEWLKITYYDEDGADVSERFRLQTPAQRTAFEQLFIRPHTRTPGIPLRWITA 540

Query: 541 ADIVAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRRAHELRG 586
           ADI+AQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFR AHELRG
Sbjct: 541 ADILAQQALLRHPDFVVARMKGQYWQVREKVFDYEGRFRLAHELRG 586