Pairwise Alignments

Query, 586 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 748 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC99

 Score = 75.5 bits (184), Expect = 7e-18
 Identities = 98/370 (26%), Positives = 152/370 (41%), Gaps = 60/370 (16%)

Query: 5   LRPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELARVARGRVLVLAHVKELVAQ 64
           LR  Q+EAV A L +        V+  PT  GK++  A +    +   L+L H  EL+ Q
Sbjct: 386 LRAEQEEAVSALLRY-----DTGVLCAPTAFGKTVTAAAVIAKRKVNTLILVHRTELLKQ 440

Query: 65  NHAKYCALGLEAD-IFAAGLKRKESQGKVVFGSVQSVARN--LDAFQEEFSLLIVDECHR 121
              +        D I   G  + +  G +    VQS++R   ++     +  +IVDECH 
Sbjct: 441 WQERLAVFLQAGDSIGIIGGGKHKPCGNIDIAVVQSISRQGEVEPLVRNYGQIIVDECHH 500

Query: 122 IGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQFHYHGMVRGNDNALFRDC 181
           IG    S        L + N    LLGLTATP R                       RD 
Sbjct: 501 IGAVSFSAI------LKETNARY-LLGLTATPIR-----------------------RDG 530

Query: 182 IYELPLRYM--IKHGYLTP---PERLDMPVVQYDFSRLQAQSNGLFSEA---DLNRELKK 233
           ++ +   Y   I+H  + P   P  L++ +      R +  S  L S+A   D+ RE+  
Sbjct: 531 LHPIIFMYCGAIRHTAVRPKESPHNLEVLI------RSRFTSGHLPSDARIQDIFREIAL 584

Query: 234 QQRITPHIISQIME-FAQTRKGVMIFAATVEHAKEIVGLLPADDAA--LITGDTPGPERD 290
               T  I  + M+ F Q RK V++     +H  EI  ++ +   +  ++ G     +R 
Sbjct: 585 DHDRTVAIAEEAMKAFGQGRK-VLVLTERTDHLDEIASVMNSLKLSPFILHGRLSKKKRA 643

Query: 291 ALIDNFKA---QRFRYLVNVS-VLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAP 346
            LI    A      R L++   ++  GFD P +D + +  P       QQ  GR  R   
Sbjct: 644 MLISGLNALPPDSPRILLSTGRLIGEGFDHPPLDTLILAMPVSWKGTLQQYAGRLHREHT 703

Query: 347 GKTDCLILDY 356
           GK+D  I+D+
Sbjct: 704 GKSDVRIIDF 713