Pairwise Alignments

Query, 586 a.a., ATP-dependent RNA helicase YejH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 810 a.a., DEAD/DEAH box helicase from Escherichia coli ECRC99

 Score = 80.5 bits (197), Expect = 2e-19
 Identities = 104/432 (24%), Positives = 182/432 (42%), Gaps = 76/432 (17%)

Query: 6   RPYQQEAVDATLSHFRRHRTPAVIVLPTGAGKSLVIAELA-----RVARGRVLVLAHVKE 60
           R YQ +A++ T+      +   ++V+ TG GK+    ++         + R+L LA    
Sbjct: 171 RYYQLQAINKTIEAVSNGQNRVLLVMATGTGKTYTAFQIIWRLWKSKNKKRILFLADRNI 230

Query: 61  LVAQNHAKYCALGLEADIFAAGLKRKESQGKVV----------FGSVQSVARNLDAFQEE 110
           LV Q            D    G    +  G+ +          + ++     +  AF++ 
Sbjct: 231 LVDQTKNN--------DFQPFGTAMTKVSGRTIDPAYEIHLALYQAITGPEEDQKAFKQV 282

Query: 111 ----FSLLIVDECHRIGDDEDSQYQQILTHLSKVNPHLRLLGLTATPFRLGKGWIYQFHY 166
               F L+++DECHR    EDS +++IL + S        +GLTATP    +        
Sbjct: 283 APDFFDLIVIDECHRGSASEDSAWREILDYFSSATQ----IGLTATPKETHE-------- 330

Query: 167 HGMVRGNDNALFRDCIYELPLRYMIKHGYLTPPE--RLDMPVVQYDFSRLQAQS--NG-- 220
              V   D   F D +Y   L+  I+ G+L P +  R+D+ V    +   + Q+  NG  
Sbjct: 331 ---VSSTD--YFGDPVYVYSLKEGIEDGFLAPYKVVRVDIDVDLQGWRPTKGQTDLNGEV 385

Query: 221 ----LFSEADLNRELKKQQR--ITPHIISQIMEFAQTRKGVMIFAATVEHA----KEIVG 270
               ++++ D +R +   +R  +    I+  ++        ++F   ++HA    + +V 
Sbjct: 386 IDDRIYNQKDFDRTMVIDERTELVARTITDYLKRTNPMDKTIVFCNDIDHAERMRRALVN 445

Query: 271 LLPAD------DAALITGDTPGPERDALIDNFKAQRFRYLV---NVSVLTTGFDAPHVDL 321
           L P            ITGD    +  A +DNF   +  Y V      ++TTG DA    L
Sbjct: 446 LNPEQVKKNDKYVMKITGDDEIGK--AQLDNFINPKKPYPVIATTSELMTTGVDAKTCKL 503

Query: 322 IAILRPTESVSLYQQIVGRGLRLAP--GKTDCLILDYAGNPHDLYAPE--VGSPKGKSDN 377
           + + +  +S++ ++QI+GRG R+    GK    ILD+     +L+A E   G P+   D 
Sbjct: 504 VVLDQNIQSMTKFKQIIGRGTRIDERYGKLWFTILDFK-KATELFADERFDGIPEKVMDT 562

Query: 378 VPVQVFCPACGF 389
            P  +  P   F
Sbjct: 563 TPEDIADPESDF 574