Pairwise Alignments

Query, 679 a.a., FIG01045166: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 710 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Variovorax sp. SCN45

 Score =  130 bits (326), Expect = 3e-34
 Identities = 140/567 (24%), Positives = 236/567 (41%), Gaps = 60/567 (10%)

Query: 26  RNTIAMCLALTFAYYLNLDEPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGATAALII 85
           ++ +A  LA+  A    L  P+WA+ +  VV+ P  G V SK++ R  G+L+G+TA +++
Sbjct: 19  KSFVAAMLAMYLASRAGLPRPFWALMTTYVVAHPLAGAVRSKAVYRFCGTLIGSTATVLL 78

Query: 86  AGHTLNEPWLFLFSMAAWIGFCTWACAHFTNNAAYAFQLSGYTAAIIAFPMVNIVEITQL 145
                N P L    +A W+G C           +Y F L+GYTAA+I FP V       L
Sbjct: 79  VPALSNAPELLTLVLALWVGLCLCISLFDRTPRSYVFMLAGYTAALIGFPSVQTP--LAL 136

Query: 146 WDIAQARVCEVIVGILCGGMM-MMILPSTSDGTAL-LTAFKNMHARLLEHASLLWQPETT 203
           +D A ARV E+ +GI C  ++  ++LP+    T L L     + AR  +    L QP   
Sbjct: 137 FDTAVARVEEIGLGIFCATLIHSLVLPAGLAPTVLGLLDRTLLDAR--KWLGDLLQPAAH 194

Query: 204 DAIRSAHEG-----------VIGQILTMNLLRIQAFWSHYRFRRQNALLNALLHQQLRLT 252
                A+ G           + G I  + LL     +     R     + A+  +   LT
Sbjct: 195 GGGNGANGGEPKRLDDDRRRLAGDITQLRLLSTHVPFDTTHLRWTAGAIRAMQDRVAALT 254

Query: 253 SVISSLRRML-----LNWPTPPENSREVIE--QLLAELAKPRADSYTVAQIIAPLR---- 301
             +S++   L           P+ +  + +  Q L E A+P AD+ T A+ +  LR    
Sbjct: 255 PALSAVEDRLQALAQAEGRLAPDVTAVLAQAAQWLREEAEPGADAATRAERLQTLRRAID 314

Query: 302 -----PQDEQDYRHLAFWQRLRYFCQLYLRSSRQLYLIESGAPVDQIH------------ 344
                P + Q  +H A+ + LR        + R   L++      Q+             
Sbjct: 315 ALSATPANAQP-QHTAWGRALRIGL-----AGRLEELVDGWTACAQLRQDIDEGLKGAAP 368

Query: 345 IRRTPGLAR---HTDNAEAIWSGVRTFCTLTVIGAWSIGAQWESGPGALTLAAISCVLYS 401
           +RRT  L     H D   A+ S +     + + GA+ I   W  G  A  +AA+ C  ++
Sbjct: 369 LRRTAALGSRVLHRDYGMALLSALAAVIAICLCGAFWILTGWPMGSAATMMAAVFCCFFA 428

Query: 402 IVATPFKSLSLLMRTLVLLSLFSFVVKFGLMVQITDLWQFLLFLFPLFVTMQLLKLQMPK 461
            +  P  ++   ++  +     S +    LM  + D    +L   PL +   LL L +P+
Sbjct: 429 TMDDPVPAIHGFLKWTLWSIPISALYVLVLMPMVQDFGMLVLICAPLLL---LLGLYLPR 485

Query: 462 LAGLWGQLIVFMG--SFIAVTNPPVYDFADFLNDNTAKIVGVAISWLAFAILRPGSDAVK 519
                  + +  G    +A+ +    D   F+N    ++VGV ++     ++R       
Sbjct: 486 PTHFMAAMALIFGVCGTLALHDTASSDLVSFINSMIGQVVGVVVAARVTRLVRSVGADWS 545

Query: 520 SRRHIRALRRDFVDQ-LSRHPSHNESE 545
           +RR  RA  R+  D   S  P + +S+
Sbjct: 546 ARRIQRATWRELGDMAASSQPQYAQSD 572