Pairwise Alignments

Query, 679 a.a., FIG01045166: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 687 a.a., Tetrapartite efflux system, inner membrane component FusBC-like from Variovorax sp. SCN45

 Score = 90.9 bits (224), Expect = 2e-22
 Identities = 50/147 (34%), Positives = 78/147 (53%), Gaps = 2/147 (1%)

Query: 23  YALRNTIAMCLALTFAYYLNLDEPYWAMTSAAVVSFPTVGGVISKSLGRIAGSLLGATAA 82
           ++L++     LAL  A    L  P+WA  +A +V+ P  G V SK+L R  G+L G  A 
Sbjct: 13  FSLKSFAGAMLALYVASRAGLPRPFWAFMTAYIVAHPLAGNVRSKALYRFVGTLAGCAAT 72

Query: 83  LIIAGHTLNEPWLFLFSMAAWIGFCTWACAHFTNNAAYAFQLSGYTAAIIAFPMVNIVEI 142
           +++       P L   ++A W G C +      +  +Y F L+GY+AA+I FP+V     
Sbjct: 73  VVLIPSLSASPELLSLALALWTGLCLYLSLLDRSARSYVFMLAGYSAALIGFPLVEAP-- 130

Query: 143 TQLWDIAQARVCEVIVGILCGGMMMMI 169
             ++D A ARV E+ +GILC  ++  I
Sbjct: 131 AAMFDTAVARVQEIGLGILCASLVHSI 157



 Score = 35.8 bits (81), Expect = 7e-06
 Identities = 38/178 (21%), Positives = 65/178 (36%), Gaps = 3/178 (1%)

Query: 354 HTDNAEAIWSGVRT-FCTLTVIGAWSIGAQWESGPGALTLAAISCVLYSIVATPFKSLSL 412
           H D   A+ S +     T      W + A W SG  A   AA+ C  ++ +  P  ++  
Sbjct: 368 HLDRGLALRSALTAVLATCACCAIWILTA-WPSGSAAAMSAAVFCSFFATMDDPVPAMHK 426

Query: 413 LMRTLVLLSLFSFVVKFGLMVQITDLWQFLLFLFPLFVTMQLLKLQMPKLAGLWGQLIVF 472
            +  L+     S      +M    D     L + P F+ +     +        G     
Sbjct: 427 FVVALLWSLPASVFCVLAVMPLARDFGMLALCIAPFFLVVGCYIARPASSLAALGMFFGV 486

Query: 473 MGSFIAVTNPPVYDFADFLNDNTAKIVGVAISWLAFAILRPGSDAVKSRRHIRALRRD 530
            G+ +A+ +    D    +N N A I+G   +    A++R       ++R  RA  RD
Sbjct: 487 AGT-LALQDTASADLPSLVNSNLALILGGVAAARVTALVRSVGSDWSAKRIRRATWRD 543