Pairwise Alignments

Query, 679 a.a., FIG01045166: hypothetical protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 670 a.a., putative efflux protein (PET) component of YdhJK efflux pump from Escherichia coli BL21

 Score = 1152 bits (2979), Expect = 0.0
 Identities = 569/670 (84%), Positives = 612/670 (91%), Gaps = 1/670 (0%)

Query: 1   MKLSLPALRNTPWFKATSGQWRYALRNTIAMCLALTFAYYLNLDEPYWAMTSAAVVSFPT 60
           M  S  +LRN PWFKAT  QWRYALRNTIAMCLALT AYYLNLDEPYWAMTSAAVVSFPT
Sbjct: 1   MNASSWSLRNLPWFKATLAQWRYALRNTIAMCLALTVAYYLNLDEPYWAMTSAAVVSFPT 60

Query: 61  VGGVISKSLGRIAGSLLGATAALIIAGHTLNEPWLFLFSMAAWIGFCTWACAHFTNNAAY 120
           VGGVISKSLGRIAGSLLGA AAL++AGHTLNEPW FL SM+AW+GFCTWACAHFTNN AY
Sbjct: 61  VGGVISKSLGRIAGSLLGAIAALLLAGHTLNEPWFFLLSMSAWLGFCTWACAHFTNNVAY 120

Query: 121 AFQLSGYTAAIIAFPMVNIVEITQLWDIAQARVCEVIVGILCGGMMMMILPSTSDGTALL 180
           AFQL+GYTAAIIAFPMVNI E +QLWDIAQARVCEVIVGILCGGMMMMILPS+SD TALL
Sbjct: 121 AFQLAGYTAAIIAFPMVNITEASQLWDIAQARVCEVIVGILCGGMMMMILPSSSDATALL 180

Query: 181 TAFKNMHARLLEHASLLWQPETTDAIRSAHEGVIGQILTMNLLRIQAFWSHYRFRRQNAL 240
           TA KNMHARLLEHASLLWQPETTDAIR+AHEGVIGQILTMNLLRIQAFWSHYRFR+QNA 
Sbjct: 181 TALKNMHARLLEHASLLWQPETTDAIRAAHEGVIGQILTMNLLRIQAFWSHYRFRQQNAR 240

Query: 241 LNALLHQQLRLTSVISSLRRMLLNWPTPPENSREVIEQLLAELAKPRADSYTVAQIIAPL 300
           LNALLHQQLR+TSVISSLRRMLLNWP+PP  +RE++EQLL  LA  + D YTVA+IIAPL
Sbjct: 241 LNALLHQQLRMTSVISSLRRMLLNWPSPPGATREILEQLLTALASSQTDVYTVARIIAPL 300

Query: 301 RPQDEQDYRHLAFWQRLRYFCQLYLRSSRQLYLIESGAPVDQIHIRRTPGLARHTDNAEA 360
           RP +  DYRH+AFWQRLRYFC+LYL+SS++L+ ++SG   D   + RT GLARHTDNAEA
Sbjct: 301 RPTNVADYRHVAFWQRLRYFCRLYLQSSQELHRLQSGVD-DHTRLPRTSGLARHTDNAEA 359

Query: 361 IWSGVRTFCTLTVIGAWSIGAQWESGPGALTLAAISCVLYSIVATPFKSLSLLMRTLVLL 420
           +WSG+RTFCTL +IGAWSI +QW++G  ALTLAAISCVLYS VA PFKSLSLLMRTLVLL
Sbjct: 360 MWSGLRTFCTLMMIGAWSIASQWDAGANALTLAAISCVLYSAVAAPFKSLSLLMRTLVLL 419

Query: 421 SLFSFVVKFGLMVQITDLWQFLLFLFPLFVTMQLLKLQMPKLAGLWGQLIVFMGSFIAVT 480
           SLFSFVVKFGLMVQI+DLWQFLLFLFPL  TMQLLKLQMPK A LWGQLIVFMGSFIAVT
Sbjct: 420 SLFSFVVKFGLMVQISDLWQFLLFLFPLLATMQLLKLQMPKFAALWGQLIVFMGSFIAVT 479

Query: 481 NPPVYDFADFLNDNTAKIVGVAISWLAFAILRPGSDAVKSRRHIRALRRDFVDQLSRHPS 540
           NPPVYDFADFLNDN AKIVGVA++WLAFAILRPGSDA KSRRHIRALRRDFVDQLSRHP+
Sbjct: 480 NPPVYDFADFLNDNLAKIVGVALAWLAFAILRPGSDARKSRRHIRALRRDFVDQLSRHPT 539

Query: 541 HNESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRAWESRSDPLSRVR 600
            +ESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLR WESRSDPLSRVR
Sbjct: 540 LSESEFESLTYHHVSQLSNSQDALARRWLLRWGVVLLNCSHVVWQLRDWESRSDPLSRVR 599

Query: 601 DICISLLRDVMSERGVQQRPLAVTLQELQRICDTLAHHHQPAAHELAAIIWRLHCSLSQL 660
           D CISLLR VMSERGVQQ+ LA TL+ELQRICD+LA HHQPAA ELAAI+WRL+CSLSQL
Sbjct: 600 DNCISLLRGVMSERGVQQKSLAATLEELQRICDSLARHHQPAARELAAIVWRLYCSLSQL 659

Query: 661 EQAPAQGTLA 670
           EQAP QGTLA
Sbjct: 660 EQAPPQGTLA 669