Pairwise Alignments

Query, 544 a.a., Nickel ABC transporter, periplasmic nickel-binding protein nikA2 (TC 3.A.1.5.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 524 a.a., nickel/heme ABC transporter periplasmic binding protein from Escherichia coli BL21

 Score = 99.8 bits (247), Expect = 2e-25
 Identities = 90/353 (25%), Positives = 157/353 (44%), Gaps = 28/353 (7%)

Query: 74  LLHAPLLKQNADMSWGNLLTEKVDTSPDGKIWTLTLKPGLKFSDGSPLTAEDVVFTYNKA 133
           +++ PL+K  AD S    L +    S DGK WT TL+  +KFS+G P  AE     +   
Sbjct: 54  MVYEPLVKYQADGSVIPWLAKSWTHSEDGKTWTFTLRDDVKFSNGEPFDAEAAAENFRAV 113

Query: 134 AKSGGK---IDMGN-FSHARALDARRIEMTLSHPQSTFVNVLG----SLGIVPASRYDEK 185
             +  +   +++ N     +AL    +++TL      F+  L        I P+   + +
Sbjct: 114 LDNRQRHAWLELANQIVDVKALSKTELQITLKSAYYPFLQELALPRPFRFIAPSQFKNHE 173

Query: 186 TF--AREPIGAGPYRLVSFQPGQQLIVEANPWYAGKKNDFNRLVF-VFLDEDNAYAAARS 242
           T    + PIG GP+ L + +  Q  +   N  Y G+K    ++ F V  D      A  +
Sbjct: 174 TMNGIKAPIGTGPWILQASKLNQYDVFVRNENYWGEKPAIKKITFNVIPDPTTRAVAFET 233

Query: 243 GQLGLV----RIAPSMAVAPQQDNLKLWVRDSVENRGIVFPMVPAGKKDANDYPVGNDVT 298
           G + L+     + P    A    N     + S     ++  +  A              T
Sbjct: 234 GDIDLLYGNEGLLPLDTFARFSQNPAYHTQLSQPIETVMLALNTA-----------KAPT 282

Query: 299 ADVAIRRAINYAINRKQLAEQVMEG-HAIPAYSAVQGLPWQNPSVIFSDGDIAKARAILE 357
            ++A+R A+NYA+N+K L +  + G   +        +P+ N  +     D  KA+A+LE
Sbjct: 283 NELAVREALNYAVNKKSLIDNALYGTQQVADTLFAPSVPYANLGLKPRQYDPQKAKALLE 342

Query: 358 EAGWKINSA-GVREKAGKEARLTLWYASGDSTRRDLAEAVRAMLQPLGIVVSL 409
           +AGW + +   +REK G+  R+ L +   D+  + +AE ++A ++ +G  VSL
Sbjct: 343 KAGWTLPAGKDIREKNGQPLRIELSFIGTDALSKSMAEIIQADMRQIGADVSL 395