Pairwise Alignments

Query, 221 a.a., Flagellar L-ring protein FlgH from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 231 a.a., flagellar basal body L-ring protein from Pseudomonas simiae WCS417

 Score =  132 bits (332), Expect = 5e-36
 Identities = 83/220 (37%), Positives = 113/220 (51%), Gaps = 13/220 (5%)

Query: 5   VATLTGCAWIPAKPLVQGATTAQP-IPGPVPVANGSIFQSAQPINYGYQPLFEDRRPRNI 63
           +A L GC     KP         P  P P    NGSI+Q+    N     L+ DR+   +
Sbjct: 13  IAVLAGCVAPTPKPNDPYYAPVLPRTPLPAAANNGSIYQAGFEQN-----LYSDRKAFRV 67

Query: 64  GDTLTIVLQENVSASKSSSANASRDGKTSFG----FDTVPRYLQGLFGNSRADMEA--SG 117
           GD +TI L E   ASK++++   +  K   G    F  VP     L G+    + A  SG
Sbjct: 68  GDIITITLNERTQASKNANSQVGKTSKAGIGLTSLFGAVPNVNNPL-GDGDLSLSAGYSG 126

Query: 118 GNSFNGKGGANASNTFSGTLTVTVDQVLANGNLHVVGEKQIAINQGTEFIRFSGVVNPRT 177
             + NGK  A   N+ +G++TVTV  VL NG + V GEK + +N G E +R +G+V    
Sbjct: 127 DRATNGKSAAGQGNSLTGSITVTVADVLPNGIIAVRGEKWMTLNTGDELVRIAGMVRADD 186

Query: 178 ISGSNSVPSTQVADARIEYVGNGYINEAQNMGWLQRFFLN 217
           IS  N+VPST++ADARI Y G G   +A   GW  RFFL+
Sbjct: 187 ISTDNTVPSTRIADARITYSGTGAFADASQPGWFDRFFLS 226