Pairwise Alignments

Query, 506 a.a., Aerotaxis sensor receptor protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 517 a.a., PAS domain-containing protein from Dickeya dadantii 3937

 Score =  407 bits (1047), Expect = e-118
 Identities = 216/507 (42%), Positives = 328/507 (64%), Gaps = 10/507 (1%)

Query: 7   VSQLNTPLDDDTTLMSTTDLESYITHANDTFVQVSGYQLNELLAQPHNLVRHPDMPKAAF 66
           VSQ   PLD    LMS T  +S+IT+AN  F++VSGY+  EL+ QPHN++RHPDMP +AF
Sbjct: 7   VSQRQYPLDARIKLMSVTTPDSHITYANADFIKVSGYEPEELMNQPHNIIRHPDMPPSAF 66

Query: 67  ADMWYTLKQGEPWSGIVKNRRKNGDHYWVRANAVPMIREGRVTGYMSIRTRATDDEVAAV 126
           ADMW TLK G+ W+G+VKNRRKNGDHYWVR++  P+ R+G++ GYMS+RT AT +E++  
Sbjct: 67  ADMWNTLKAGKIWTGVVKNRRKNGDHYWVRSSTTPLKRDGKLMGYMSVRTAATAEEISQA 126

Query: 127 EPLYQALNEGRCSKR-IHKGLVVRQGLLGKLP---AMPVRWRVRSIMGLMAVMLALALFG 182
           E LY  +N+G    R  H GL+V  G L  L     MP+RWR+RS  GL+  +L LA+  
Sbjct: 127 EALYAQVNQGMLKNRAFHHGLLVYTGPLKWLSLFKTMPLRWRIRSYFGLLG-LLPLAVAF 185

Query: 183 TDASWQALLLGALAMLAGTA-----LLEWQIVRPIENVATQALKVATGERNSVQHLNRSD 237
                 AL+ G  A L   A     LL   + RP+E +  QA++ A G+ NS+  LNR+D
Sbjct: 186 ALLPKTALVWGLFAALIAFACLFCELLVQHVARPVEQILEQAMRSAAGQANSLTQLNRAD 245

Query: 238 ELGLTLRAVGQLGLMCRWLINDVSSQVSSVRNGSERLAKGNNDLNEHTRQTVENVQETVT 297
           E+G+ +RAV Q G+  R  ++DV+S +  ++     +A+GN+ L E   +T E++Q+T  
Sbjct: 246 EIGMLMRAVNQSGMNFRTFVDDVNSNLQELKTACSEIAQGNHILAECCEKTEESLQQTAA 305

Query: 298 TMNQMAESVKLNSETASAADKLSMAASSAATQGGEAMDTVIKTMDDIAHSTQRIGTITTL 357
           ++ Q+  ++K N++ +  A + +   +    +G + +  V  TM+ I  +++RI  I  +
Sbjct: 306 SVEQLTATIKSNADASLRASQYAEDVNQVVNEGDQPVSEVANTMEAITGASERITDIIGV 365

Query: 358 INDIAFQTNILALNAAVEAARAGEQGKGFAVVAGEVRHLASRSANAANDIRKLIDASATK 417
           ++++AFQTNILA+NAAVEAA AGEQGK FAVVA EVR LA RSA +A DI  LID + + 
Sbjct: 366 LDNLAFQTNILAVNAAVEAAHAGEQGKSFAVVASEVRSLAQRSAASAKDIAALIDNTLSS 425

Query: 418 VQSGSEQVHAAGRTMDDIVAQVQNVTLLIARISQSTQEQTDGLSSLTRAVDELNRITQKN 477
           +++G +QV    R+M++I+ +VQ+VT L+  IS +T+EQ+ GL  +  AV+ ++ +T +N
Sbjct: 426 IRAGDQQVAHTNRSMNNILVKVQDVTHLMNDISLATKEQSQGLQQINDAVNRIDELTHQN 485

Query: 478 AALVEESAQVSAMVKHRASRLEDAVTV 504
            AL  +S   +  ++ + + +  AV+V
Sbjct: 486 TALASQSNSATGHLQQQIASMAQAVSV 512