Pairwise Alignments

Query, 577 a.a., Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 601 a.a., single-stranded-DNA-specific exonuclease RecJ from Rhizobium sp. OAE497

 Score =  281 bits (720), Expect = 4e-80
 Identities = 196/568 (34%), Positives = 296/568 (52%), Gaps = 27/568 (4%)

Query: 22  LPPLLRRLYASRGV---RSARELERSVKGMLPWQQ-LSGIDNAVEILYNAFREGTRIIVV 77
           LP L+ R+ A RGV    +   L+ +++ ++P    L+  + A   L  A R G  + + 
Sbjct: 46  LPDLIARVLAGRGVSVDEAVEFLDPTIRSLMPDPYTLTDCEKAARRLAEAIRRGENVAIF 105

Query: 78  GDFDADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPEVVDQAKARGAQLIVTVD 137
           GD+D DGA S+AL    +   G     Y +P+R  +GYG +   ++Q    GAQLIVTVD
Sbjct: 106 GDYDVDGAASSALMYRFLAHFGVKAEIY-IPDRIFEGYGPNAGAINQLIDNGAQLIVTVD 164

Query: 138 NGISSHAGVAHAKTLGIPVIVTDHHLPGDTLPDAEAIINPNLRDCEFPSKSLAGVGVAFY 197
            G +SH  +  AK   I V+V DHH     LP   A++NPN  D       L   GV F 
Sbjct: 165 CGSTSHEALDAAKARNIDVVVIDHHQVTHALPHCYALVNPNREDDLSGQGHLCAAGVVFL 224

Query: 198 LMLALRTFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPLDANNRILTWQGLSRIRA 257
           +++A    LR+ G   ++ I   +L + LD+VAL TV DVVPL   NR    +GL   R 
Sbjct: 225 VLVATLRLLREAG---DKRILAIDLLQWLDIVALATVCDVVPLKGLNRAYVVKGLVAAR- 280

Query: 258 GKCRPGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNLGEARV 317
            +   G+ AL   +      +     GF +GPR+NA GR+ D ++G  LL  D+ GEA  
Sbjct: 281 HQGNAGLAALFRKAGLS-GPVTPYHFGFLVGPRINAGGRIGDAALGSRLLTLDDAGEAET 339

Query: 318 LASELDALNQTRKEIEQGM--QAEALILCEKLERSSETLPGGLAMYHPEWHQGVVGILAS 375
           +A +LD LN+ R+ +E  M  +AEA    E  +    ++   +     +WH G+VG+LA+
Sbjct: 340 IAQKLDELNRDRQAMEAAMLQEAEAEAFAEYGDGQGASV---IVTARDKWHPGIVGLLAA 396

Query: 376 RIKERFHRP--VIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPDLMIKFGGHAMAA 433
           R+KE+F RP   IAF P+G GT  GSGRSI G  M   +     +   L++K GGHAMAA
Sbjct: 397 RLKEKFKRPAFAIAFDPSGRGT--GSGRSINGFDMGRMVRA--AVDEGLLVKGGGHAMAA 452

Query: 434 GLSLEEHKFEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQLLRDAGPWGQ 493
           GL++E  K    +  F E   + +   +    +  DG + A+  ++++   L  AGP+G 
Sbjct: 453 GLTVEREKLGALRSFFTERAEKTVANLVANETLKIDGAIGASGATLDLIDRLETAGPYGS 512

Query: 494 MFPEPLFD-GRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTTCWP----DNGVR 548
              +P+F     RL   R VGE+H+KV +E + G   LDGIAF    T       ++   
Sbjct: 513 GHSQPVFAIPAHRLRDVRTVGEKHVKVTLEAMDGA-RLDGIAFRAADTALGNLLLNSRGA 571

Query: 549 EVELAYKLDINEFRGNRSLQIIIDDIWP 576
            + +A  +  + ++G+R +Q+ + D  P
Sbjct: 572 NLHVAGSIGADHYQGSRRIQLRVSDAAP 599