Pairwise Alignments

Query, 577 a.a., Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 560 a.a., Single-stranded-DNA-specific exonuclease RecJ from Methylophilus sp. DMC18

 Score =  508 bits (1307), Expect = e-148
 Identities = 273/548 (49%), Positives = 375/548 (68%), Gaps = 15/548 (2%)

Query: 22  LPPLLRRLYASRGVRSARELERSVKGMLPWQQLSGIDNAVEILYNAFREGTRIIVVGDFD 81
           LPPL+ RL A+RGV SA    + +  +L  + L+G       L +A  +  RI+++GD+D
Sbjct: 21  LPPLMARLLAARGVTSADWGLQDMPHLLKPEALTGAAEMARQLADAIAQQQRILIIGDYD 80

Query: 82  ADGATSTALSVLGMRALGCDNISYLVPNRFEDGYGLSPEVVDQAKARGAQLIVTVDNGIS 141
           ADGAT+T++++ G+R +G + + +LVPNRFE GYGL+PE+V  A  R  Q+++TVDNGI+
Sbjct: 81  ADGATATSVAMRGLRMMGAE-VDFLVPNRFEYGYGLTPEIVALAATRQPQVLLTVDNGIA 139

Query: 142 SHAGVAHAKTLGIPVIVTDHHLPGDTLPDAEAIINPNLRDCEFPSKSLAGVGVAFYLMLA 201
           S  GVA AK LG+ V++TDHHLP +  P A+ I+NPN R C FPSK LAGVGV FY+++A
Sbjct: 140 SIEGVAAAKALGLRVLITDHHLPAEQTPAADCIVNPNQRGCGFPSKHLAGVGVMFYVLIA 199

Query: 202 LRTFLRDKGWFDERNIAPPNLAELLDLVALGTVADVVPLDANNRILTWQGLSRIRAGKCR 261
           LR  L+ +G   E  +   +L  LLDLVALGTVAD+V LDANNRIL  QGL RIR G+  
Sbjct: 200 LRAELKQRGQLAEDQV---HLGRLLDLVALGTVADLVRLDANNRILVRQGLKRIRQGQAC 256

Query: 262 PGIKALLEISNRDPQQLAASDLGFALGPRLNAAGRLDDMSVGVALLLCDNLGEARVLASE 321
           PGI+A+L+++ RDPQQ++A DLGF +GPRLNAAGRLDDM++G+  LL D   EA   A +
Sbjct: 257 PGIQAILKLAGRDPQQVSAQDLGFYVGPRLNAAGRLDDMTIGIRCLLADTPQEAMQYAQQ 316

Query: 322 LDALNQTRKEIEQGMQAEALILCEKLERSSETLPGGLAMYHPEWHQGVVGILASRIKERF 381
           L  LN  RK+IE  MQ +A+    +  R  +     ++++ P+WHQGV+GILASRIKERF
Sbjct: 317 LHRLNAERKQIEAEMQFDAMADLNQDFRPEQYT---ISVFQPDWHQGVIGILASRIKERF 373

Query: 382 HRPVIAFAPAGDGTLKGSGRSIQGLHMRDALERLDTLYPDLMIKFGGHAMAAGLSLEEHK 441
           HRPVI FA AGDG +KGSGRSI GLH+RDAL+ +    PDL++KFGGHAMAAGLS+    
Sbjct: 374 HRPVIVFADAGDGLIKGSGRSIAGLHLRDALDLVTKQQPDLIVKFGGHAMAAGLSVRAED 433

Query: 442 FEQFQQRFGELVTEWLDPALLQGEVISDGPLSAAEMSMEVAQLLRDAGPWGQMFPEPLFD 501
           F +FQQ F ++V   +   +LQ  + +DG L+  EMS++ A+LL     WGQ FP+P+F 
Sbjct: 434 FSRFQQAFEQVVQSLISAEVLQEMLETDGGLAPNEMSLQTAELLTQ-HVWGQGFPQPVFY 492

Query: 502 GRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNIDTTCWPDNGVREVELAYKLDINEF 561
            +F +L Q+L+ E+HLK+ ++        D I F        +    +V LAY L +NE+
Sbjct: 493 DQFDVLSQKLLAEKHLKLRLQK--HNQQFDAIYFQ-----HAEPLPEQVALAYSLQVNEY 545

Query: 562 RGNRSLQI 569
            G+RS+Q+
Sbjct: 546 NGHRSVQL 553