Pairwise Alignments

Query, 286 a.a., Integral membrane protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 282 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  178 bits (451), Expect = 1e-49
 Identities = 96/272 (35%), Positives = 156/272 (57%), Gaps = 2/272 (0%)

Query: 17  ILLFAALLHASWNAIVKAGNDKLYAAIGVSGSAAVMALILLPFSPQPAHASIPFLAASTA 76
           ++L +A +HA+WNA+V+AG+ +      V G+A V+ L+ LP    P+     ++  S  
Sbjct: 10  LVLISAFMHATWNAVVRAGSSRFMTLAMVDGTALVICLLALPLVSVPSLEVGGYILVSVV 69

Query: 77  LQVVYTVLVAKTYQVSDMSQTYPLMRGTAPLLVALISVLFLGDSLSSLAWVGIAVICMAI 136
           L  VY + + K Y+  D  Q YP+MRG  P+LVAL S   L + LS  A VG+++IC+ I
Sbjct: 70  LNTVYRLFLIKAYETGDFGQVYPVMRGVPPVLVALFSYFLLHEQLSVQALVGVSLICVGI 129

Query: 137 LGMACNGRASSQ--RGVVLALTNACFIAGYTLVDGTGVRLSETALGYTLWSFFLNGACLL 194
           + +    R ++Q  + +++A+    FIA YT+VD  GVR SET L Y ++        + 
Sbjct: 130 ISLTFVRRMTAQMFKPILMAVCAGAFIASYTVVDAKGVRTSETVLQYIVYLTVFQSIPIP 189

Query: 195 TWAMIARRREASRYLAQQWKKGIFGGIGTMGSYGLALWAMTQAPLAVVAALRETSILFGA 254
             A    R   ++ +   W+ G+ GG+  + SY L L+A++   +A V+ALRETS++ GA
Sbjct: 190 LLAFSKERSALAQAIRGHWRVGLLGGVFYLASYALVLFALSLDAVAKVSALRETSVIIGA 249

Query: 255 LIAWLLLKEKVAGLRLVAAGGIALGAILLRLS 286
           +IA L   E+    R+++A  I  G IL+++S
Sbjct: 250 IIAALFFHERFGWRRMLSAFVIVSGIILIKVS 281