Pairwise Alignments

Query, 533 a.a., Rtn protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 513 a.a., diguanylate phosphodiesterase from Pseudomonas simiae WCS417

 Score =  242 bits (617), Expect = 3e-68
 Identities = 175/519 (33%), Positives = 271/519 (52%), Gaps = 37/519 (7%)

Query: 12  RRNRFIVCTICALVTLIL-TLSIRFISERNLNHHRTVAFANHAVDALDNVLHPLLVGRNI 70
           R +R+++ ++ AL+ + L  + + + +ER L    +   A  AV   D +L    +    
Sbjct: 11  RASRYLITSLSALLPIALGVIILHWQAERTLQQS-SAQTAQEAVRQFDLMLDNTALAAQA 69

Query: 71  LLPLLELPCAT-AHLPLRKQAARLQTIRSIGLVKEGILYCSSIFGARNTPIRQLQPDLPA 129
           LLPL   PC + A L LR+Q  R   +R+  L  +  +YCSS+FG+    +  + PD   
Sbjct: 70  LLPLAGQPCDSGAQLALREQVTRRPFVRATTLSWQKNIYCSSLFGSNY--MSPVNPDDYV 127

Query: 130 VGDLLLLSTDQSLLKGSPILIQWYP------ASADGQDGVMEIVNIDLLTTMLLEPQQPQ 183
            G L L++ +      + ++ +         AS DG      +  I+L   ++L+     
Sbjct: 128 AGQLWLMNGNPVTPDTALLVYRLVDGDKAAFASIDGYHLTNALRLINLYAHLVLQ----- 182

Query: 184 ITSASLTVGKRHLLYGRGVVDT-LPELKKDEERYQLSSRHFPFTISVSGPSAGVLAFKHL 242
                  VG   L     V DT +P      E   L+S  + ++++   P+  V  +   
Sbjct: 183 -------VGPNWLGTDGKVRDTAMPVFAVANEH--LASERYHYSVNAGMPAGEVWRYMQA 233

Query: 243 --PTQLPLAVLLSLLIGYIA-WLATASRMSFSWEINLALAEREFELFCQPLLNARTQQCT 299
             P    L V   +L G++A WL   S    + E+  AL   EF  + QP++   T++  
Sbjct: 234 RYPAMFSLIVFFGVLAGFLAHWLQKRSSAP-TQELQRALGANEFIPYFQPVVRGDTREWA 292

Query: 300 GVEILLRWNNPRQGWISPDVFIPIAEEHNLIAPLTRYVIAETIRQR--HYFPINHQFHIG 357
           G E+L+RW +P++G + PD+FIP+AE   LI P+TR ++ +T  Q   H    +  FHIG
Sbjct: 293 GCEVLMRWQHPKEGLVRPDLFIPLAEHSGLIVPMTRALLRQTAAQLSPHASRFSPGFHIG 352

Query: 358 INVAASHFRHGVLLKDLNQYWFSAEPVQQ--LVLELTERDALL--DVDYRLMRELHRKGV 413
           +N+ A H +   L+ D  ++  +A PV Q  LVLELTER+ ++  D+  RL   LH+ GV
Sbjct: 353 VNITARHCQDLALVDDCREF-LAAFPVGQVTLVLELTERELIVPTDITRRLFDALHQLGV 411

Query: 414 KLAIDDFGTGNSSLSWLEKLRPDILKIDKSFTAAIGTDAVNSTVTDIIIALGQRLNIELV 473
            +AIDDFGTG+SSL +L     D LKID+SF A IG DA++  + D II L  +L++ +V
Sbjct: 412 MIAIDDFGTGHSSLGYLRNFNVDYLKIDQSFVAMIGADALSLHILDSIIELSGKLDLGIV 471

Query: 474 AEGVENQTQAQHLRQHGVQMLQGYLYAKPMPISEFPQWL 512
           AEGVE   Q+ +L   GV  LQGYL+ KP+P  EF Q L
Sbjct: 472 AEGVETPEQSDYLAAQGVDFLQGYLFGKPLPCDEFIQSL 510