Pairwise Alignments

Query, 533 a.a., Rtn protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 528 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score =  238 bits (608), Expect = 3e-67
 Identities = 167/476 (35%), Positives = 240/476 (50%), Gaps = 23/476 (4%)

Query: 48  AFANHAVDALDNVLHPLLVGRNILLPLLELPCATAHLPLRKQAARLQTIRSIGLVKEGIL 107
           A    A++ ++++L  L    N LLPL + PC  A L LR Q  R   +RS  L +   L
Sbjct: 47  ATTRQALEHVEHILDNLSRAANSLLPLTDSPCEQAQLMLRAQVTRNAFVRSTNLFRHNNL 106

Query: 108 YCSSIFGARNTPIRQLQPDLPAVGDLLLLSTDQSLLKGSPILIQWYPASADGQDGVMEIV 167
           YCSS+FG    P+    P     G L L+  + S+  G P+L+  Y AS DG  G +  V
Sbjct: 107 YCSSLFGEFEEPVN---PGDYVDGKLWLMDGN-SVTPGHPLLV--YRAS-DGDHGAITTV 159

Query: 168 NIDLLTTMLL---EPQQPQITSASLTVGKRHLLYGRGVVDTLPELKKDEERYQLSSRHFP 224
           + D L T L      ++ QI      +GK       GVV              + S  +P
Sbjct: 160 DGDHLLTALRLIGPDEELQIRVGDAWMGKD------GVVHKGASPAAASANVLIGSTRYP 213

Query: 225 FTIS--VSGPSAGVLAFKHLPTQLPLAVLLSLLIGYIAWLATASRMSFSWEINLALAERE 282
           F++    S    G L   H P  L L ++L  L             S   E++ AL   E
Sbjct: 214 FSVQGGYSADKQGQLLRSHYPGLLSLLLILGALAALACRWQIRRATSPRAELDRALQADE 273

Query: 283 FELFCQPLLNARTQQCTGVEILLRWNNPRQGWISPDVFIPIAEEHNLIAPLTRYVIAETI 342
           F  + QP++     +  G E+L+RW++PR+G + PD+FIP AE    I  +TR ++  T 
Sbjct: 274 FLPYFQPVVRKGDYRWAGAEVLMRWHHPREGLVRPDLFIPYAEHSGQIVAMTRALLTHTA 333

Query: 343 RQRHYFP--INHQFHIGINVAASHFRHGVLLKDLNQYWFSAEPVQQ-LVLELTERDAL-- 397
           +    +   +   FHIG+N+ A H R   LL D   +     P +  L LELTER  +  
Sbjct: 334 QSLAPYAGLLEDGFHIGVNITADHCRDLSLLDDCRTFLQHFPPGRVVLTLELTERKLIEP 393

Query: 398 LDVDYRLMRELHRKGVKLAIDDFGTGNSSLSWLEKLRPDILKIDKSFTAAIGTDAVNSTV 457
             V   L  +LH  GV +A+DDFGTG SSL++L + + D LKID+SF A IG DA++  +
Sbjct: 394 TPVTLELFEKLHAMGVMIALDDFGTGQSSLNYLRQFKVDYLKIDQSFVAMIGADALSVHI 453

Query: 458 TDIIIALGQRLNIELVAEGVENQTQAQHLRQHGVQMLQGYLYAKPMPISEFPQWLA 513
            + II L  +L++ +VAEGVE   Q  +L  HGV   QGYL+A+PMP ++F + LA
Sbjct: 454 LETIIELSGKLDLGIVAEGVETDLQRDYLAAHGVDFQQGYLFARPMPAAQFLEALA 509