Pairwise Alignments

Query, 321 a.a., Peptide transport system permease protein SapB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 350 a.a., ABC transporter permease from Serratia liquefaciens MT49

 Score =  181 bits (459), Expect = 2e-50
 Identities = 115/329 (34%), Positives = 168/329 (51%), Gaps = 26/329 (7%)

Query: 6   LRRLLLLLVTLFFLTFIGFSLSYFTPHAPL------QGASLWNAWV-------------F 46
           L  LL L +TL  L    F LS+  P  P         +    A V             F
Sbjct: 22  LTGLLSLALTLLGLLLFTFMLSHLAPIDPTLQIAGDHASEATYAQVRHDLGLDQPLPVQF 81

Query: 47  W--FNGLLHWDFGVSSINGQLISEQLKEVFPATMELCILAFGFALMVGIPVGMLAGVTRS 104
           W     L H D G+S I  Q +   L   FPAT+EL   A       GI +  LA +   
Sbjct: 82  WRYLVHLAHGDMGISRITAQPVLSDLLRTFPATVELATCAIILGAFGGITLAFLAVIKPG 141

Query: 105 KWPDRFISALALLGFSIPVFWLALLLTLFFSLTLGWLPVSGRFD--LLYEVKPVTGFAII 162
            W D     L+L+G+S+P+FWL+LL  L F  TL W    GR D   LY ++P +GF +I
Sbjct: 142 SWLDNAARLLSLIGYSVPIFWLSLLGLLLFYATLHWSAGPGRLDDIYLYSMEPRSGFVLI 201

Query: 163 DAWISDSPWRDEMVMSAIRHMVLPVLTLSVAPTTEVIRLMRISTIEVYDQNYVKAAATRG 222
           D W+S      +M  +AI H+ LPV+ L++     + RL+R + +E  ++ YV  A ++G
Sbjct: 202 DTWLSGDR---DMFYNAISHLWLPVVALALLSMAGITRLLRAAMLEECNKEYVTLARSKG 258

Query: 223 LSRFTILRRHVLHNALPPVIPRLGLQFSTMLTLAMITEMVFSWPGLGRWLIHAIRQQDYA 282
            SR  IL RHV  N L  +I  L L ++++L  A++TE VF+WPG+GR+L  A+   D  
Sbjct: 259 ASRTRILVRHVFPNVLGTLITVLSLSYASLLEGAVLTETVFAWPGVGRYLTTALFAADTP 318

Query: 283 AISAGVMVIGSLVIVVNVISDILGAMANP 311
           AI    ++IG+  +V+N ++D L  + +P
Sbjct: 319 AILGATLLIGTCFVVLNALADALTYLVDP 347