Pairwise Alignments

Query, 495 a.a., Methyl viologen resistance protein smvA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 511 a.a., multidrug efflux MFS transporter permease subunit EmrB from Serratia liquefaciens MT49

 Score =  162 bits (409), Expect = 3e-44
 Identities = 130/493 (26%), Positives = 232/493 (47%), Gaps = 26/493 (5%)

Query: 5   WLTLVIIVLVYIPVAIDATVLHVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGAL 64
           W+T+ + +  ++ V +D+T+ +VA PT++  LG+S ++  W+I  + +  A  +   G L
Sbjct: 13  WMTVALALATFMQV-LDSTIANVAIPTIAGNLGSSNSQGTWVITSFGVANAISIPITGWL 71

Query: 65  GDRIGFKRLLMLGGTLFGLASLAAAFSHTASWLIATRVLLAIGAAMIVPATLAGIRATFC 124
             RIG  RL +    LF LAS     S++   LI  RV+  + A  ++P + + +   + 
Sbjct: 72  AKRIGEVRLFLWSTALFVLASWLCGISNSLGMLIFFRVIQGVVAGPLIPLSQSLLLNNYP 131

Query: 125 EEKHRNMALGVWAAVGSGGAAFGPLIGGILLEHFYWGSVFLINVPI-VLVVMGLTARYVP 183
             K R MAL +W+        FGP++GG + ++++WG +F IN+PI  +V++   +    
Sbjct: 132 PAK-RAMALALWSMTVIVAPIFGPILGGYISDNYHWGWIFFINIPIGAVVILVAMSTLKG 190

Query: 184 RQAGRRDQPLNLGHAVMLIIAI--LLLVYSAKTALKGHLSLWVISFTLLTGALLLGLFIR 241
           R+     +P++    V+LI+ I  L ++      L    S  +I  T++    LL L + 
Sbjct: 191 RETKTEIKPIDTVGLVLLIVGIGSLQVMLDQGKELDWFNSTEIIVLTVVAVVALLFLIV- 249

Query: 242 TQLATSRPMIDMRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPYEAGVFM 301
            +L    P++D+ LF  R    G +    A +   G  +L+ Q LQ V+G +   AG+  
Sbjct: 250 WELTDDHPVVDLSLFKSRNFTVGCLCISLAYMLYFGAIVLLPQLLQEVYGYTATWAGLAS 309

Query: 302 LPVMVASGFSGPIAGVLVSRLGLRLVATGGMALSALSFYGLAMT-----DFSTQQWQAWG 356
            PV +      PI G   +RL +R + T    + A+ FY  A T     DF    W  + 
Sbjct: 310 APVGLIPVLLSPIIGKFGNRLDMRRLVTFSFIMYAVCFYWRAYTFEPGMDFGASAWPQF- 368

Query: 357 LMALLGFSAASALLASTSAIMAAAPAEKAAAAGAIETMAYELGAGLGIAIFGLLLSRSFS 416
              + GF+ A   +  T+  ++  P E+ AAA ++      L   +G +I   L ++  S
Sbjct: 369 ---IQGFAIACFFMPLTTITLSGLPPERMAAASSLSNFTRTLAGSIGTSITTTLWTQRES 425

Query: 417 ------ASIRLPAGLEAQEIARASSSMGEAVQLANSLPPTQGQAILDAARHAFIWSHSVA 470
                      P   ++QE+ R    +G + Q A++    +       A+   I ++ + 
Sbjct: 426 QHHSQLTEFVNPYNPQSQEMYRQLEQIGMSKQQASAYIANE-----ITAQGLIISANEIF 480

Query: 471 LSSAGSMLLLLAV 483
             SAG  L+LL +
Sbjct: 481 WLSAGVFLVLLVL 493