Pairwise Alignments

Query, 615 a.a., ATP-dependent DNA helicase RecQ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 708 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas fluorescens GW456-L13

 Score =  563 bits (1451), Expect = e-165
 Identities = 288/596 (48%), Positives = 402/596 (67%), Gaps = 4/596 (0%)

Query: 19  AKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVS 78
           A++VL++ FGY  FR  Q AII+   SG D LV+MPTGGGKSLC+Q+PALL +GL VVVS
Sbjct: 5   AQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLREGLAVVVS 64

Query: 79  PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLYIAPERLMLDNFL 138
           PLI+LM DQV  L   GVAAA LNST S EQQ ++ A  R G++++LY+APERL+    L
Sbjct: 65  PLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLAARIRRGEVKMLYLAPERLVQPRML 124

Query: 139 DHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDI 198
             L   +  L A+DEAHC+SQWGHDFRPEY  LGQL + FP +P +ALTATAD  TR++I
Sbjct: 125 SFLQGLDISLFAIDEAHCVSQWGHDFRPEYLQLGQLAEMFPDVPRIALTATADKRTREEI 184

Query: 199 IRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDT 258
           +  L L D    +SSFDRPNI Y ++ K +P  QL+ ++ E+R  +GI+YC SR KVE+ 
Sbjct: 185 VTRLHLQDAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKKVEEV 244

Query: 259 AARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 318
           AA L  +G  A  YHAGL N +R   Q++F  ++  I+VATVAFGMGI+KPNVRFV H D
Sbjct: 245 AAFLSEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATVAFGMGIDKPNVRFVAHLD 304

Query: 319 IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL-QDIERHKLNAM 377
           +P+++E+YYQETGR GRDGLPA+A + Y   D+  L++ L+     +  + +E+HKL+AM
Sbjct: 305 LPKSLEAYYQETGRGGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAM 364

Query: 378 GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLNDAQIALSTIGRVNQRFG 437
            +  E   CRR  LL YF E   EPCG+CD C+D  + +D    A+ ALS I R  QR+G
Sbjct: 365 LSLCEETRCRRQTLLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQALSAIYRTGQRYG 424

Query: 438 MGYVVEVIRGANNQRIRDFGHDKLKVYGMGREKSHEHWVSVIRQLIHLGLVMQNIAQHSA 497
           +G++V+V+ G +N+++R FGH  L VYG+G+  +   W S+ RQL+  GL   ++  +  
Sbjct: 425 VGHLVDVLLGKDNEKVRSFGHQHLSVYGVGKTMAEGEWRSLFRQLVARGLADIDLEGYGG 484

Query: 498 LQLTDAARPVLRGDVPLKL---AVPRIVALKPRVMQKSFGGNYDRKLFAKLRKLRKAIAD 554
           L+L+D+ RP+L+G+V L+L      + VA   +          +R+ +  LR LR+ +A+
Sbjct: 485 LRLSDSCRPLLKGEVTLELRRDLKAQTVAKSSKSQASQLVRGEEREQWEALRALRRKLAE 544

Query: 555 EENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALIRAHVD 610
           E  +PPYV+F D+TL+EM    P S +EM +V+GVG RKLER+G+ F+ ++   V+
Sbjct: 545 EHGVPPYVIFPDSTLLEMLRSQPTSLAEMATVSGVGARKLERYGEAFLEVLGGQVE 600