Pairwise Alignments

Query, 615 a.a., ATP-dependent DNA helicase RecQ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 709 a.a., ATP-dependent DNA helicase RecQ from Pseudomonas sp. DMC3

 Score =  550 bits (1418), Expect = e-161
 Identities = 286/596 (47%), Positives = 398/596 (66%), Gaps = 13/596 (2%)

Query: 19  AKQVLQETFGYQQFRPGQEAIIDTALSGRDCLVVMPTGGGKSLCYQIPALLLDGLTVVVS 78
           A++VL++ FGY  FR  Q AII+   SG D LV+MPTGGGKSLC+Q+PALL +GL VVVS
Sbjct: 5   AQRVLKDIFGYDSFRGRQGAIIERVASGGDALVLMPTGGGKSLCFQVPALLREGLAVVVS 64

Query: 79  PLISLMKDQVDQLLANGVAAACLNSTQSREQQLEVMAGCRTGQIRLLYIAPERLMLDNFL 138
           PLI+LM DQV  L   GVAAA LNST S EQQ ++    + G++++LY+APERL+    L
Sbjct: 65  PLIALMDDQVATLEELGVAAAALNSTLSAEQQRDLALRIKRGEVKMLYLAPERLVQPRML 124

Query: 139 DHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPALPFMALTATADDTTRQDI 198
             L      L A+DEAHC+SQWGHDFR EY  LGQL + FP +P +ALTATAD  TR++I
Sbjct: 125 AFLQSLEIALFAIDEAHCVSQWGHDFRREYLQLGQLAELFPNVPRIALTATADKRTREEI 184

Query: 199 IRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGKSGIIYCNSRAKVEDT 258
           +  L L +    +SSFDRPNI Y ++ K +P  QL+ ++ E+R  +GI+YC SR KVE+ 
Sbjct: 185 VDRLHLQNAERFLSSFDRPNIFYRIVPKEQPRKQLLAFLAERRSDAGIVYCLSRKKVEEV 244

Query: 259 AARLQSRGISAAAYHAGLENAIRVDVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHFD 318
           AA L  +G  A  YHAGL N +R   Q++F  ++  I+VATVAFGMGI+KPNVRFV H D
Sbjct: 245 AAFLSEQGFPALPYHAGLPNDLRAYHQKRFLNEEGLIMVATVAFGMGIDKPNVRFVAHLD 304

Query: 319 IPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQL-QDIERHKLNAM 377
           +P+++E+YYQETGR GRDGLPA+A + Y   D+  L++ L+     +  + +E+HKL+AM
Sbjct: 305 LPKSLEAYYQETGRGGRDGLPADAWMAYGLQDVVMLKQMLQNSEGDERHKRLEQHKLDAM 364

Query: 378 GAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGLNDAQIALSTIGRVNQRFG 437
            +  E   CRR  LL YF E   EPCG+CD C+D  + +D    A+ ALS I R  QR+G
Sbjct: 365 LSLCEETRCRRQALLAYFDEDMPEPCGHCDNCVDGVQTWDATEPARQALSAIFRTGQRYG 424

Query: 438 MGYVVEVIRGANNQRIRDFGHDKLKVYGMGREKSHEHWVSVIRQLIHLGLVMQNIAQHSA 497
           +G++V+V+ G +N+++R FGH  L V+G+G+  S   W S+ RQL+  GL   +   +  
Sbjct: 425 VGHLVDVLLGKDNEKVRSFGHQHLSVFGVGKALSESEWRSLFRQLVARGLADVDHEGYGG 484

Query: 498 LQLTDAARPVLRGDVPLKLAVPRIVALKPRVMQKSFGGNY--------DRKLFAKLRKLR 549
           L+L D+ RP+L+G+V L+L       LKP+V  K+   +         +R+ +  LR LR
Sbjct: 485 LRLNDSCRPLLKGEVKLELRRD----LKPQVTAKTGSKSQASQLVRGEEREQWEALRALR 540

Query: 550 KAIADEENIPPYVVFNDATLIEMAEQMPVSASEMLSVNGVGMRKLERFGKEFMALI 605
           + +A+E  +PPYV+F D+TL+EM    P S +EM  V+GVG RKLER+G+ F+ ++
Sbjct: 541 RKLAEEHGVPPYVIFPDSTLLEMLRSQPTSLAEMARVSGVGARKLERYGEAFLEVL 596