Pairwise Alignments

Query, 388 a.a., Ribosomal RNA large subunit methyltransferase N (EC 2.1.1.-) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 390 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  295 bits (755), Expect = 1e-84
 Identities = 173/383 (45%), Positives = 227/383 (59%), Gaps = 23/383 (6%)

Query: 21  KINLLDLNRQQMREFFKNLG----EKPFRADQVMKWMYHYCCDNFDEMTDINKVLRGKLK 76
           K +L+ L R++M E    +G    +   R  Q+  W+Y     +FD MT++ K LR KLK
Sbjct: 4   KPSLIGLTREEMGEALAEIGVPQKQVKMRVSQLWNWLYVRGVSDFDNMTNVAKELREKLK 63

Query: 77  EVAEIRAPEVVEEQRSSDGTIKWAIAVGDQ------RVETVYIPEDDRATLCVSSQVGCA 130
               I  PE+VEEQ S+DGT KW +    +       +ETVYIPE+ R TLC+SSQVGC+
Sbjct: 64  AAFTIARPEIVEEQISNDGTRKWLMRFPPRGAGRPVEIETVYIPEEGRGTLCISSQVGCS 123

Query: 131 LECKFCSTAQQGFNRNLRVSEIIGQVWRA----------AKIVGAAKVTGQRPITNVVMM 180
           L C FC T  Q   RNL   EI+ Q+  A          +  VGA   +  R ++N+VMM
Sbjct: 124 LTCSFCHTGTQRLVRNLTAEEILSQLLLARDRLGDFPDGSTPVGAYVPSEGRKVSNIVMM 183

Query: 181 GMGEPLLNLTNVVPAMEIMLDDFGFGLSKRRVTLSTSGVVPALDKLGDMIDVALAISLHA 240
           GMGEPL N  +V  A+ I  D  G  LSKRRVTLSTSGVVP + + GD I V LAISLHA
Sbjct: 184 GMGEPLYNFEHVKTALLIATDGDGLSLSKRRVTLSTSGVVPEIFRTGDEIGVMLAISLHA 243

Query: 241 PNDTIRDEIVPINKKYNIETFLGAVRRYLEKSNANQGRVTIEYVMLDHVNDGTEHAHQLA 300
             D +RD +VPINKKY ++  + A R Y   SNA   R+T EYVML  VND  E A  L 
Sbjct: 244 VRDDLRDMLVPINKKYPLKELIEACRNYPGVSNAR--RITFEYVMLKDVNDSLEDAKMLV 301

Query: 301 ELLKETPCKINLIPWNPFPGAPYGRSSNSRIDRFSKVLMSYGFTTIVRKTRGDDIDAACG 360
           +LLK  P KINLIP+NP+PG  Y  S  ++I++F+  +   G+ + +R  RG DI AACG
Sbjct: 302 QLLKGVPAKINLIPFNPWPGTNYQCSEWAQIEKFADFINQAGYASPIRTPRGRDILAACG 361

Query: 361 QLAGDVIDRTKRTLRKRMQGEVI 383
           QL  +  +R ++T R   +  +I
Sbjct: 362 QLKSE-SERMRKTERLAFEAMMI 383