Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 313 a.a., ABC transporter substrate-binding protein from Paraburkholderia sabiae LMG 24235

 Score = 65.1 bits (157), Expect = 2e-15
 Identities = 62/260 (23%), Positives = 119/260 (45%), Gaps = 16/260 (6%)

Query: 14  KMIALLTAFGLASAAMTVQAAER--IAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDG 71
           ++I +    G  + A ++  A+   I  I K     F+ +  +GA+++ K   + +T++G
Sbjct: 5   RLIGIAIGVGALAGASSLTYADEPYIPLISKGFQHQFWQAVKSGAEQSAKEHNVRITFEG 64

Query: 72  P-TEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTK--- 127
           P TE  V  Q+ +++  + +   A+ ++A+      P LKRA    + ++ +DS      
Sbjct: 65  PETEAMVDKQIDMLSAALAKKPQALGIAALDSKAAIPLLKRAQSSKIPVIAFDSGVDSDI 124

Query: 128 PECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQ-WVKEAKAKIS 186
           P       N          + EM  +    E   +    +S T  D+   ++ E K+K  
Sbjct: 125 PLTTCATDNLAAAALAADKMAEMIGNS--GEVGVIVHDQTSRTGIDRRDGFLNEMKSK-- 180

Query: 187 QEHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAII-APDANALPAAAQAAENLKRN 245
             HP  +IV+ Q+G  D  KS + A+ +I+A P+L  I  A + +A  AA    E+ K+ 
Sbjct: 181 --HPNVKIVSVQYGGGDHLKSAEIAKAMIQANPNLKGIFGANEGSAEGAAIGVKESGKK- 237

Query: 246 NLAIVGFSTPNVMRPYVQRG 265
            L ++G+ +    +  +  G
Sbjct: 238 -LVLIGYDSGKEQKEDITSG 256