Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 333 a.a., ABC-type sugar transport system, periplasmic component from Enterobacter asburiae PDN3

 Score =  546 bits (1406), Expect = e-160
 Identities = 270/334 (80%), Positives = 295/334 (88%), Gaps = 4/334 (1%)

Query: 14  KMIALLTAFGLASAAMTVQAAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPT 73
           K+  L  A   A A    QAA+RIAFIPKLVGVGFFTSGGNGA+EAGK LG+DVTYDGPT
Sbjct: 4   KLFVLAMALSFAPA----QAADRIAFIPKLVGVGFFTSGGNGAKEAGKELGVDVTYDGPT 59

Query: 74  EPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPECRSY 133
           EPSVSGQVQL+NNFVNQGY+AIIVSAVSPDGLCPALKRAMQRGVK+LTWDSDTKPECRS 
Sbjct: 60  EPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVKVLTWDSDTKPECRSI 119

Query: 134 YINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQEHPGWE 193
           YINQGTP+QLG +LVEMA  QV K  AKVAFFYSSPTVTDQNQWVKEAKAKI ++HP W+
Sbjct: 120 YINQGTPEQLGGLLVEMAGKQVTKPNAKVAFFYSSPTVTDQNQWVKEAKAKIEKDHPQWQ 179

Query: 194 IVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNLAIVGFS 253
           +VTTQFGYNDATKSLQTAEGI+KAYPDLDAIIAPDANALPAAAQAAENLKR  +AIVGFS
Sbjct: 180 VVTTQFGYNDATKSLQTAEGILKAYPDLDAIIAPDANALPAAAQAAENLKREGVAIVGFS 239

Query: 254 TPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSP 313
           TPNVMRPYV+RGTVK FGLWDVVQQG+I+V VA+ LLK   +NVGDS+D+  IG + V P
Sbjct: 240 TPNVMRPYVERGTVKAFGLWDVVQQGRIAVNVADRLLKKGDLNVGDSVDVKNIGALKVEP 299

Query: 314 NSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF 347
           NS QGY YEAKGNGIVLLPERV+F K+NI KYDF
Sbjct: 300 NSVQGYQYEAKGNGIVLLPERVVFTKENISKYDF 333