Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 340 a.a., Autoinducer 2-binding protein LsrB from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  585 bits (1508), Expect = e-172
 Identities = 288/340 (84%), Positives = 312/340 (91%)

Query: 8   MARHSIKMIALLTAFGLASAAMTVQAAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDV 67
           M  H  K IALL+  G+A+ +M VQAAERIAFIPKLVGVGFFTSGGNGAQ+AGK LG+DV
Sbjct: 1   MTLHRFKKIALLSVLGIAAISMNVQAAERIAFIPKLVGVGFFTSGGNGAQQAGKELGVDV 60

Query: 68  TYDGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTK 127
           TYDGPTEPSVSGQVQL+NNFVNQGY+AIIVSAVSPDGLCPALKRAMQRGV++LTWDSDTK
Sbjct: 61  TYDGPTEPSVSGQVQLINNFVNQGYNAIIVSAVSPDGLCPALKRAMQRGVRVLTWDSDTK 120

Query: 128 PECRSYYINQGTPKQLGSMLVEMAAHQVDKEKAKVAFFYSSPTVTDQNQWVKEAKAKISQ 187
           PECRSYYINQGTP QLG MLV+MAA QV+K+KAKVAFFYSSPTVT+QNQWVKEAKAKI++
Sbjct: 121 PECRSYYINQGTPAQLGGMLVDMAARQVNKDKAKVAFFYSSPTVTEQNQWVKEAKAKIAK 180

Query: 188 EHPGWEIVTTQFGYNDATKSLQTAEGIIKAYPDLDAIIAPDANALPAAAQAAENLKRNNL 247
           EHPGWEIVTTQFGYNDATKSLQTAEGI+KAY DLDAIIAPDANALPAAAQAAENLK + +
Sbjct: 181 EHPGWEIVTTQFGYNDATKSLQTAEGILKAYSDLDAIIAPDANALPAAAQAAENLKNDKV 240

Query: 248 AIVGFSTPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIG 307
           AIVGFSTPNVMRPYV+RGTVKEFGLWDVVQQGKISVYVA+ALLK   M  GD LDI G+G
Sbjct: 241 AIVGFSTPNVMRPYVERGTVKEFGLWDVVQQGKISVYVADALLKKGSMKTGDKLDIQGVG 300

Query: 308 KVTVSPNSEQGYHYEAKGNGIVLLPERVIFNKDNIDKYDF 347
           +V VSPNS QGY YEA GNGIVLLPERVIFNK+NI KYDF
Sbjct: 301 QVEVSPNSVQGYDYEADGNGIVLLPERVIFNKENIGKYDF 340