Pairwise Alignments

Query, 347 a.a., Autoinducer 2 (AI-2) ABC transport system, periplasmic AI-2 binding protein LsrB from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 297 a.a., ABC transporter periplasmic-binding protein YphF from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 54/216 (25%), Positives = 100/216 (46%), Gaps = 16/216 (7%)

Query: 47  GFFTSGGNGAQEAGKALGIDVTY-DGPTEPSVSGQVQLVNNFVNQGYDAIIVSAVSPDGL 105
           G++     G Q+A K   + V   +   +  +S +   V+  V +  DAII+SAVS +G 
Sbjct: 12  GYYAGVRQGVQDAAKDSSVQVQLIETNAQGDISKECTFVDTLVARNVDAIILSAVSENGS 71

Query: 106 CPALKRAMQRGVKILTWDSDTKPECRSYYINQ---GTPKQLGSMLVEMA-----AHQVDK 157
              ++RA + G+ ++ +++    +    Y++    G P + G  L   A     A+++D+
Sbjct: 72  SRTVRRASEAGIPVICYNTCINQKGVDKYVSAYLVGDPLEFGKKLGNAAADYFIANKIDQ 131

Query: 158 EKAKVAFFYSSPTVTDQNQWVKEA-KAKISQEHPGWEIVTTQFGYNDATKSLQTAEGIIK 216
            K  V    +      + +  +E  KA++    PG +IV  Q G     K++   E +I 
Sbjct: 132 PKIAVINCEAFEVCVQRRKGFEEVLKARV----PGAQIVANQEG-TVLDKAISVGEKLII 186

Query: 217 AYPDLDAIIAPDANALPAAAQAAENLKR-NNLAIVG 251
           + PDL+AI+     A   A +A  N  +   +A+ G
Sbjct: 187 STPDLNAIMGESGGATLGAVKAVRNQNQAGKIAVFG 222