Pairwise Alignments

Query, 349 a.a., Nitrogen regulation protein NtrB (EC 2.7.13.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 608 a.a., Signal transduction histidine-protein kinase AtoS from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score =  126 bits (317), Expect = 1e-33
 Identities = 95/346 (27%), Positives = 169/346 (48%), Gaps = 22/346 (6%)

Query: 12  ILNSLINSVLVVDDALAIHYANPAAQQLLAQSSRKLFGTPLPELLSYFSLNIDLMRESLA 71
           I+ +  + V+ +D    +   NPAA+ +      +L G P   L         ++ ++L 
Sbjct: 267 IIENAADGVIAIDRQGDVTTMNPAAEVITGYQRHELVGQPYSMLFDNTQFYSPVL-DTLE 325

Query: 72  AGQGFTDNEVTLVIDSRSHILSLTAQRLPDDF-----ILLEMAPMDNQRRLSQEQLQHAQ 126
            G      E++     R+  LS+T  R+ +        L+  + +   R+ +Q ++  A+
Sbjct: 326 HGTEHVALEISFPGRDRTIELSVTTSRIHNTHGEMIGALVIFSDL-TARKETQRRMAQAE 384

Query: 127 QIAAR-DLVRGLAHEIKNPLGGLRGAAQLLSKALPDPALTEYTKVIIEQADRLRNLVDRL 185
           ++A   +L+ G+AHE++NPL  +RG  Q+L +   DP   EY  V++++ D +  ++ +L
Sbjct: 385 RLATLGELMAGVAHEVRNPLTAIRGYVQILRQQTSDPIHQEYLSVVLKEIDSINKVIQQL 444

Query: 186 LG---PQHPGMHITESIHKVAERVVALVSMELPDNVRLIRDYDPSLPELPHDPEQIEQVL 242
           L    P+H           V E +V + +  +   V  I + D  L  +  D E ++QVL
Sbjct: 445 LEFSRPRHSQWQQVSLNALVEETLVLVQTAGVQARVDFISELDNELSPINADRELLKQVL 504

Query: 243 LNIVRNALQALGPEGGEITLRTRTAFQLTLHGERYRLAARIDVEDNGPGIPPHLQDTLFY 302
           LNI+ NA+QA+   G       +   Q   + +  +    I +EDNG GI   LQ  +F 
Sbjct: 505 LNILINAVQAISARG-------KIRIQTWQYSDSQQA---ISIEDNGCGIDLSLQKKIFD 554

Query: 303 PMVSGREGGTGLGLSIARNLIDQHAGKIEFTSWPGH-TEFSVYLPI 347
           P  + +  GTGLGL++++ +I+ H G I   S PG+   F++ LPI
Sbjct: 555 PFFTTKASGTGLGLALSQRIINAHQGDIRVASLPGYGATFTLILPI 600