Pairwise Alignments

Query, 469 a.a., Nitrogen regulation protein NR(I) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 483 a.a., two component response regulator from Agrobacterium fabrum C58

 Score =  394 bits (1013), Expect = e-114
 Identities = 209/474 (44%), Positives = 313/474 (66%), Gaps = 15/474 (3%)

Query: 6   VWVVDDDSSIRWVLERALAGAGLTCTTFENGNEVLAALASKTPDVLLSDIRMPGMDGLAL 65
           + V DDD++IR VL +AL+ AG       N   +   +++   D++++D+ MP  +   L
Sbjct: 5   ILVADDDAAIRTVLNQALSRAGYDVRITSNAATLWRWVSAGEGDLVVTDVVMPDENAFDL 64

Query: 66  LKQIKQRHPMLPVIIMTAHSDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQ 125
           L +IK+  P LPV++M+A +    A+ A ++GA+DYLPKPFD+ E +A++ RA+S  + +
Sbjct: 65  LPRIKKARPDLPVLVMSAQNTFMTAIKASEKGAYDYLPKPFDLTELIAIIGRALS--EPK 122

Query: 126 QQPRNIEVNGPT-TDMIGEAPAMQDVFRIIGRLSRSSISVLINGESGTGKELVAHALHRH 184
           ++P  ++ +      ++G + AMQ+++R++ RL ++ ++++I GESGTGKELVA ALH +
Sbjct: 123 RKPAKLDDDMQDGMPLVGRSAAMQEIYRVLARLMQTDLTLMITGESGTGKELVARALHDY 182

Query: 185 SPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGDM 244
             R   PF+A+NMAAIP+DLIESELFGHEKGAFTGA     GRFEQA+GGTLFLDEIGDM
Sbjct: 183 GKRRNGPFVAINMAAIPRDLIESELFGHEKGAFTGAQNRSTGRFEQAEGGTLFLDEIGDM 242

Query: 245 PLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLERRVQEGKFREDLFHRLNVI 304
           P+D QTRLLRVL  G++  VGG  P++ DVRI+AAT+++L++ + +G FREDL++RLNV+
Sbjct: 243 PMDAQTRLLRVLQQGEYTTVGGRTPIRTDVRIVAATNKDLKQSINQGLFREDLYYRLNVV 302

Query: 305 RIHLPPLRERREDIPRLARHFLQVAARELGVEAKLLHPETETALTRLAWPGNVRQLENTC 364
            + LPPLR+R EDIP L RHF+Q   +E G+E K    E    +   AWPGNVR+LEN  
Sbjct: 303 PLRLPPLRDRAEDIPDLVRHFIQTGEKE-GLEGKRFETEALEVMKAYAWPGNVRELENLI 361

Query: 365 RWLTVMAAGQEVLIQDLPGELFEASTPDSP-SHLPPDSWATLLAQWADRALRSGHQN--- 420
           R L  +   QEV+ +++  +  ++  PDSP   +   + +  ++Q  +  +R    +   
Sbjct: 362 RRLMALYP-QEVITREIIEQELQSDVPDSPLDKMAVRTGSLTISQAVEENMRDYFASFGD 420

Query: 421 ------LLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKELGM 468
                 L      ELE  L+  AL  T+G++ +AA LLG  RNTL +K++ELG+
Sbjct: 421 GLPPPGLYDRVLRELEYPLILAALTATRGNQIKAADLLGLNRNTLRKKIRELGV 474