Pairwise Alignments

Query, 236 a.a., Integrase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 436 a.a., Phage integrase from Pseudomonas sp. S08-1

 Score =  153 bits (387), Expect = 5e-42
 Identities = 88/219 (40%), Positives = 131/219 (59%), Gaps = 3/219 (1%)

Query: 13  NNPAAAIEARYITQATSRDVALTAEEIGILLRGIYTSNMNRRHKLALHLLIICMVRKSEL 72
           +NP   +     T+ +     +T +E+  LLR I   + +R  K+ L LLI+  +R SE+
Sbjct: 220 HNPVDGLHRFLQTRPSENYAHVTEDELPALLRAIDAYSGDRAVKIGLRLLILNGLRPSEV 279

Query: 73  IEATWSEVNFNALEWRIPGERMKMDNPHIVPLSKQALAMFEELKFLAGDSPYVFPSRHGY 132
            EA WSE +    +W IP  RMK   PH+VPLS Q++A+ EEL  L+G    + P R   
Sbjct: 280 REARWSEFDLANAQWEIPAARMKKKRPHVVPLSSQSMALLEELYALSGAYDLLLPGRVDR 339

Query: 133 RRPISKTTLNCAVRTLDLNVRDFVIHDFRRTASTLLHEQGYNSDWIEKYLAHKIGGVHGV 192
           ++P+S    N A+R +    +    H FR  ASTLL+E G++ + IE  L+HK  GV GV
Sbjct: 340 KKPMSNMVFNMALRRMGYQGQQ-TGHGFRHVASTLLNEAGFDENHIEAQLSHKKEGVAGV 398

Query: 193 YNRAEYLNQRREMLQSWADFVDAQIETGRKVIIGQFGKS 231
           YN+A+YL+QRR+M+Q +AD +D Q++TG  +I  +F KS
Sbjct: 399 YNKAQYLDQRRKMMQWYADHLD-QLQTG-NIIQAKFNKS 435