Pairwise Alignments

Query, 236 a.a., Integrase from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 393 a.a., integrase from Escherichia coli ECRC98

 Score =  147 bits (370), Expect = 4e-40
 Identities = 86/216 (39%), Positives = 121/216 (56%), Gaps = 2/216 (0%)

Query: 4   YAISRGIIFNNPAAAIEARYITQATSRDVALTAEEIGILLRGIYTSNMNRRHKLALHLLI 63
           YAI  G    NPA  + +   T        LTA E+   L  +     +   K A  +++
Sbjct: 177 YAIVTGRADYNPAPDLASALATPKKVHFPFLTANELPHFLTDLAGYTGSIITKTATQIIM 236

Query: 64  ICMVRKSELIEATWSEVNFNALEWRIPGERMKMDNPHIVPLSKQALAMFEELKFLAGDSP 123
           +  VR  EL  A W +++F A  W IP E MKM  PHIVP S+Q +A+F++L+ ++   P
Sbjct: 237 LTGVRTQELRFAHWEDIDFEAKLWEIPAEVMKMKRPHIVPPSEQVIALFKQLEPISKHHP 296

Query: 124 YVFPSRHGYRRPISKTTLNCAVRTLDLNVRDFVIHDFRRTASTLLHEQGYNSDWIEKYLA 183
            VF  R+  R+PISK ++N  +  L    R    H FR T ST+LHEQG+NS WIE  LA
Sbjct: 297 LVFIGRNDPRKPISKESINQVIELLGYKGR-LTGHGFRHTMSTILHEQGFNSAWIEMQLA 355

Query: 184 H-KIGGVHGVYNRAEYLNQRREMLQSWADFVDAQIE 218
           H     + G YN A+YL+ RREM+Q +AD++D+  E
Sbjct: 356 HVDKNSIRGTYNHAQYLDGRREMMQWYADYIDSLSE 391