Pairwise Alignments

Query, 319 a.a., Putative LysR-family transcriptional regulator YidZ from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 325 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  106 bits (264), Expect = 9e-28
 Identities = 89/313 (28%), Positives = 142/313 (45%), Gaps = 24/313 (7%)

Query: 4   SLTNLDLNLLLCLQLLMQERSVTKAAKRMNVTPSAVSKSLAKLRAWFDDPLFVNTPLGLA 63
           +L  +DLNLL+    L  ER+VT+A  R+  T  A+S +L++LR    D LFV  P GL 
Sbjct: 9   NLHGIDLNLLVAFDALNSERNVTRAGSRIGRTQPAMSAALSRLRFLLRDELFVRGPNGLQ 68

Query: 64  PTPLMVSMEQSLADWMQMGNQLLDKPHHQTP--RGLKFELAAESPLMMIMFNSLSQQIYQ 121
           PTP  V + + ++  ++   + L       P    + F +A  +    ++   L   + +
Sbjct: 69  PTPRAVELAEPISLALREIQRTLQFTQGFDPDKSTISFSIAVSAHAGSVILPRLLSLLEE 128

Query: 122 RYPQATIKVRNWDY--DSLEAITRGEVDIGFTGRESHPRSRELLSLLPLAIDFEVLFSDL 179
           + P   IKVR++    D++  +  G VD+   G    P SR L + L     F+  F  +
Sbjct: 129 KAPGIDIKVRDYSSRDDAVSLLDSGGVDL-TVGIPPTPTSRILSARL-----FQERFVCI 182

Query: 180 PWVWLREDHPALREAWDLDTFLRYPHISICWEQSDTWALDDVLQEMGRKRHIALSLPGFE 239
               LR+DHP L   +D +TFL   HI +  +       D  L     +R  A+++P   
Sbjct: 183 ----LRKDHPILGRPFDPETFLSLTHILVAPDNEGLDVADAALASKNFRRRAAVTIPHMH 238

Query: 240 QSLFMAAQPGHTLIATA-PRYCQHYNQLHQLPLVARPLPFDAQQREKLMVPFTLLWHKRN 298
            +  + A     ++AT       H     +L +   PLP +        VPF L WH+RN
Sbjct: 239 VAPALVA--SSDMVATVIESVVAHSGFAERLAVFDFPLPLNP-------VPFVLSWHRRN 289

Query: 299 SHNPKIVWLRQAI 311
             +P   WLR  +
Sbjct: 290 DGHPAQQWLRNGL 302