Pairwise Alignments

Query, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 342 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  260 bits (664), Expect = 4e-74
 Identities = 144/307 (46%), Positives = 200/307 (65%), Gaps = 16/307 (5%)

Query: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLAL 82
           LI +++L+    + + NFF+  N+FNIL + S+  IMAVGMT VILT+GIDLSVGS+LA+
Sbjct: 30  LIFMILLLIFFQSQNSNFFSERNIFNILTEVSIYGIMAVGMTFVILTAGIDLSVGSILAV 89

Query: 83  TGAVAASIVG------VEVNA------LVAVAAALALGAAIGAVTGVIVAKGRVQAFIAT 130
               AA ++       V+ NA      L+ +   LA+G AIG + G+ V + R+  FI T
Sbjct: 90  CAMTAAYVIKGDNFTTVDPNAWGGMSWLIGLGICLAMGTAIGFLHGLGVTRLRLPPFIVT 149

Query: 131 LVMMLLLRGVTMVYTDGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAAWYML 190
           L  M + RG+T+V  DG+P+  GF      + W+G G  LG+  P+WI AIV +  +  L
Sbjct: 150 LGGMTIWRGLTLVINDGAPI-AGFDPG---YRWWGRGELLGISIPIWIFAIVAVGGYLAL 205

Query: 191 HHTRLGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSSAQPTAG 250
           H TR GR++YA+GGN  A RL+G++V +V + VY L G  A LAG I  ARL SA+  AG
Sbjct: 206 HKTRWGRFVYAIGGNPEAARLAGVNVKRVLVSVYVLIGCLAGLAGFILSARLGSAEAVAG 265

Query: 251 TGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVI 310
             +EL  IA+VV+GGTSL GG GRI GT+IG++I+G L NGL L+ VS+YYQ I+  ++I
Sbjct: 266 ISFELRVIASVVIGGTSLMGGYGRIGGTIIGSIIMGILINGLVLMNVSAYYQQIITGLII 325

Query: 311 LLAVLVD 317
           +LAV  D
Sbjct: 326 VLAVAFD 332