Pairwise Alignments

Query, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 355 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  253 bits (646), Expect = 5e-72
 Identities = 133/333 (39%), Positives = 206/333 (61%), Gaps = 27/333 (8%)

Query: 9   RRYFTKAWLLEQKSLIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVIL 68
           ++Y    +LL+ ++ IALL+++A  S + PNF T +NL  + Q  ++  ++A+GMTLVIL
Sbjct: 3   QKYTLYMYLLKARTFIALLLVVAFFSLMVPNFLTASNLLIMTQHVAITGLLAIGMTLVIL 62

Query: 69  TSGIDLSVGSLLALTGAVAASIV--GVEV--------NALVAVAAALALGAAIGAVTGVI 118
           T GIDLSVG++  + G VA +++  G+ +        N    +     LG  IG V GV+
Sbjct: 63  TGGIDLSVGAVAGICGMVAGALLTNGIPLWGGNTLFLNVPEVILVVSVLGMLIGLVNGVV 122

Query: 119 VAKGRVQAFIATLVMMLLLRGVTMVYTDGSPV----------NTGFTDNADLFGWFGIGR 168
           + +  V  FI TL MM + RGV +++ DG             NTGF        + G G 
Sbjct: 123 ITRLVVAPFICTLGMMYVARGVALLFNDGGTYANLNGMPALGNTGFA-------FLGSGT 175

Query: 169 PLGVPTPVWIMAIVFIAAWYMLHHTRLGRYIYALGGNEAATRLSGISVSKVKIIVYSLCG 228
            LG+  P+W+M    +   Y+   T LGRYIYA+GGNE+A RL+G+ +  VKI VY+  G
Sbjct: 176 LLGIYLPIWLMLAFLLLGLYLTRKTPLGRYIYAIGGNESAARLAGVPIVNVKIFVYAFSG 235

Query: 229 LTASLAGIIEVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFL 288
           L A+L G++  ++L +A P  G  +E+DAI A VLGGT+LAGG+GR+ G++IGA ++ FL
Sbjct: 236 LCAALVGLVVASQLQTAHPMTGNMFEMDAIGATVLGGTALAGGRGRVSGSIIGAFVIVFL 295

Query: 289 NNGLNLLGVSSYYQMIVKAVVILLAVLVDNKKQ 321
            +G+ ++GVS ++QM++K +VI+ AV++D  +Q
Sbjct: 296 ADGMVMMGVSDFWQMVIKGLVIVTAVVIDQFQQ 328