Pairwise Alignments

Query, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  287 bits (734), Expect = 3e-82
 Identities = 146/295 (49%), Positives = 203/295 (68%), Gaps = 5/295 (1%)

Query: 23  LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGIDLSVGSLLAL 82
           L  L+V+  ++   S NFF+VNN+ N+L+Q SV  I+AVGMT VILT GIDLSVG+++AL
Sbjct: 30  LAGLIVVSILMGLASDNFFSVNNIMNVLRQVSVVGILAVGMTFVILTGGIDLSVGAVMAL 89

Query: 83  TGAVAASI-VGVEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIATLVMMLLLRGVT 141
            G ++A + V   ++  +A+ A L +G  IG   G +VA GR+ A I TL  M + RG+ 
Sbjct: 90  VGTLSAGLMVNTGLSPAIALPAGLFIGLGIGIFNGALVAWGRMPAIIVTLATMGMARGLG 149

Query: 142 MVYTDGSPVNTGFTDNADLFGWFGIGRPLGVPTPVWIMAIVFIAAWYMLHHTRLGRYIYA 201
           ++Y+ G PV+           WFG+GR   VP PV IM +++  AW +L  T  GR++YA
Sbjct: 150 LIYSGGYPVS----GIPSWISWFGVGRVGIVPVPVIIMVVIYAVAWVLLQRTAFGRHVYA 205

Query: 202 LGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSSAQPTAGTGYELDAIAAV 261
           LGGNE A RLSG+   +VK+ VY + G+TA+ A +I   RL S QP AG G+ELDAIAAV
Sbjct: 206 LGGNELAARLSGVKTRRVKLAVYGISGVTAAFAALILTGRLMSGQPNAGVGFELDAIAAV 265

Query: 262 VLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVKAVVILLAVLV 316
           VLGGT++AGG+G I+GTLIGA++LG LNNGLNL+G++ Y Q ++K  +ILLA+ +
Sbjct: 266 VLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLMGINPYLQDVIKGGIILLAIYI 320