Pairwise Alignments

Query, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 326 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  244 bits (624), Expect = 2e-69
 Identities = 150/308 (48%), Positives = 192/308 (62%), Gaps = 17/308 (5%)

Query: 15  AWLLEQKS-LIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGMTLVILTSGID 73
           AWL      L+ LL+L   ++  S NF ++ N  NIL Q +V  IMAVGMT VIL  GID
Sbjct: 18  AWLSGATGPLLGLLMLCVFLTFASENFLSLRNGLNILDQITVLGIMAVGMTFVILLGGID 77

Query: 74  LSVGSLLALTGAV---AASIVGVEVNALVAVAAALALGAAIGAVTGVIVAKGRVQAFIAT 130
           LSVGS+LAL+  +    A++ G+ +   +A+  AL   AA G V G++V   RV AFIAT
Sbjct: 78  LSVGSVLALSMMIMGWTANVAGMPMG--MAIVLALVASAACGLVVGILVTAFRVPAFIAT 135

Query: 131 LVMMLLLRGVTMVYTDGSPVNTGFTDNADLFGWF---GIGRPLGVPTP-VWIMAIVFIAA 186
           L MM + RG+  + TDG  +  GF D      WF    I R  GV T  V +M +V + +
Sbjct: 136 LAMMSVARGLANMITDGQQI-VGFPD------WFMMLAIERHFGVLTATVLLMLVVVLVS 188

Query: 187 WYMLHHTRLGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGIIEVARLSSAQ 246
           W  L     GR +YA+GGN    RL+GI+V  V I VY +C + A LAGI+  ARL S Q
Sbjct: 189 WAFLRFRSEGRTVYAVGGNPEVARLAGINVPLVTICVYVVCAVLAGLAGIVLAARLDSVQ 248

Query: 247 PTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLGVSSYYQMIVK 306
           P++G GYELD IAAVV+GGTSL+GG G I GTLIG LI+G L NGLNLL VS + Q ++ 
Sbjct: 249 PSSGFGYELDTIAAVVIGGTSLSGGAGGIGGTLIGVLIIGVLRNGLNLLNVSPFLQQVII 308

Query: 307 AVVILLAV 314
            VVI+LAV
Sbjct: 309 GVVIVLAV 316