Pairwise Alignments

Query, 394 a.a., MFS permease protein from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 425 a.a., transporter from Pseudomonas simiae WCS417

 Score =  354 bits (909), Expect = e-102
 Identities = 185/384 (48%), Positives = 261/384 (67%), Gaps = 1/384 (0%)

Query: 1   MTKPTHELSPALIVLMSVATGLAVASNYYAQPLLDTIAHHFSLSASSAGFIVTAAQLGYA 60
           M   +  LS A+++L++VA GL+VA+ YYAQPLLD +A  F++  ++ G I+   Q+GY 
Sbjct: 1   MRMSSSPLSGAVVLLLAVACGLSVANVYYAQPLLDAMAETFAMDHATVGIIIALTQVGYG 60

Query: 61  AGLLFLVPLGDMFERRTLIVSMTLLAAGGMLITASSQSLSMMILGTALTGLFSVVAQILV 120
            GLL LVPLGD+  RR LIVS  LL+   +L+   S S   ++ G ALTGL +VVAQ+LV
Sbjct: 61  VGLLLLVPLGDLLNRRRLIVSQLLLSTLAVLMVGWSSSSFWLLAGMALTGLLAVVAQVLV 120

Query: 121 PLAATLATPATRGKVVGTIMSGLLLGILLARTVAGLLANLGGWRTVFWVASALMALMAVA 180
            LAA LA+P  RG VVG + SG+++G+LLAR+V+G +A+L GWR+V+ +++ L  LMA+ 
Sbjct: 121 ALAAHLASPEQRGHVVGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAIL 180

Query: 181 LWRGLPKLKSDTHLN-YPQLLGSVFSLFIHDKLLRTRALLGCLTFANFSILWTSMAFLLA 239
           LWR LP  +       Y  L+ SVFSLF  +K+LR RA+L  L FA  ++LWT +   L+
Sbjct: 181 LWRVLPSTEPPRASGTYGALIRSVFSLFKEEKVLRDRAVLAMLIFAAGTVLWTPLVLPLS 240

Query: 240 APPFSYSEGMIGLFGLAGAAGALGARPAGGFADKGKSHLTTTFGLLLLLLSWLAIWLGHT 299
           APP S S   IGLFGLAGA GALGA  AG  AD+G +  T+   LLL+LLSW+AI    +
Sbjct: 241 APPLSLSHTQIGLFGLAGATGALGAAHAGRLADQGLAQWTSGTALLLMLLSWVAIGFTQS 300

Query: 300 SVLALIIGILVLDLTVQGVHITNQTVIYRLHPDARNRLTAGYMTSYFIGGAAGSLISASA 359
           S+ AL++G++V DL +Q VH+T+Q++IY + P+A++RL AGYM  Y +G A GS+ + + 
Sbjct: 301 SLWALLLGVIVFDLGLQAVHVTSQSLIYAVRPNAQSRLVAGYMLFYSVGSALGSISATAM 360

Query: 360 WQHAGWAGVCLAGVTVALLNLLVW 383
           +   GW GVC+ G  + LL L+ W
Sbjct: 361 YAWGGWIGVCVLGAAINLLALVYW 384



 Score = 30.8 bits (68), Expect = 8e-05
 Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 8/108 (7%)

Query: 278 LTTTFGLLLLLLSWLAIWLGHTSVLALIIGILVLDLTVQGVHITNQTVIYRLHPDARNRL 337
           L +T  +L++  S  + WL     L  ++ ++   L     H+ +        P+ R  +
Sbjct: 84  LLSTLAVLMVGWSSSSFWLLAGMALTGLLAVVAQVLVALAAHLAS--------PEQRGHV 135

Query: 338 TAGYMTSYFIGGAAGSLISASAWQHAGWAGVCLAGVTVALLNLLVWWR 385
                +   +G      +S +    AGW  V L    + LL  ++ WR
Sbjct: 136 VGLVTSGIVVGLLLARSVSGAMADLAGWRSVYLLSAGLTLLMAILLWR 183