Pairwise Alignments

Query, 354 a.a., L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 281 a.a., choline ABC transporter permease subunit from Pseudomonas fluorescens SBW25

 Score =  209 bits (531), Expect = 9e-59
 Identities = 109/263 (41%), Positives = 165/263 (62%), Gaps = 1/263 (0%)

Query: 62  IPLDSWVTEGIDWVVTHFRPLFQGIRVPVDYILNGFQQLLLGMPAPVAIILFALIAWQVS 121
           IPL  ++   ++W+  H    F  I   ++ +++G    L        I L AL+A  + 
Sbjct: 7   IPLGQYIAAFVEWLTQHGANYFDAIASTLETMIHGVTFALTWFNPLALIGLIALLAHFIQ 66

Query: 122 GV-GMGIATLISLIAIGAIGAWSQAMITLALVLTALLFCVVIGLPMGIWLARSPRAAKIV 180
              G+ +  + S + I  +G W + M TLA VL A L CVVIG+P+GI  A  P    ++
Sbjct: 67  RKWGLTVFVIASFLLILNLGYWQETMETLAQVLFATLVCVVIGVPLGIVAAHKPMFYTLM 126

Query: 181 RPLLDAMQTTPAFVYLVPIVMLFGIGNVPGVVVTIIFALPPIVRLTILGINQVPADLIEA 240
           RP+LD MQT P FVYL+P + LFG+G VPG++ T++FA+   +RLT LGI  VP +L++A
Sbjct: 127 RPVLDLMQTVPTFVYLIPTLTLFGLGVVPGLISTVVFAIAAPIRLTYLGIRDVPQELMDA 186

Query: 241 SRSFGASPRQMLFKVQLPLAMPTIMAGVNQTLMLALSMVVIASMIAVGGLGQMVLRGIGR 300
            ++FG S RQ+L +++LP AMP+I AG+ Q +ML+LSMVVIA+++   GLG+ V+  +  
Sbjct: 187 GKAFGCSRRQLLSRIELPHAMPSIAAGITQCIMLSLSMVVIAALVGADGLGKPVVNALNT 246

Query: 301 LDMGLATVGGVGIVILAIILDRL 323
            D+ L    G+ IV+LAI+LDR+
Sbjct: 247 ADIALGFEAGLAIVLLAIMLDRI 269