Pairwise Alignments

Query, 342 a.a., Galactose operon repressor, GalR-LacI family of transcriptional regulators from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 325 a.a., LacI family DNA-binding transcriptional regulator from Serratia liquefaciens MT49

 Score =  188 bits (478), Expect = 1e-52
 Identities = 120/331 (36%), Positives = 175/331 (52%), Gaps = 8/331 (2%)

Query: 1   MATIKDVARLAGVSVATVSRVINDSPKASEASRLAVTSAMESLSYHPNANARALAQQATE 60
           M T++DVA LAGVS ATVSRV+N        +R  V  A+  L Y PN  ARALA   + 
Sbjct: 1   MVTLEDVAALAGVSRATVSRVVNGDTNVKGQTREKVERAVAQLGYTPNPAARALASSHSN 60

Query: 61  TLGLVVGDVSDPFFGAMVKAVEQVAYHTGNFLLIGNGYHNEQKERQAIEQLIRHRCAALV 120
           TLGLV       FFGA++  V+  A   G  LL+  G ++ + E QAI++L   RC  ++
Sbjct: 61  TLGLVTTSYRGGFFGALMDFVQTEAESHGKQLLVTQGRNSAENEWQAIQRLFSLRCDGVI 120

Query: 121 VHAKMIPDADLASLMKQIPGMVLINRILPGLEHRCVALDDRYGAWLATRHLIQQGHTRIG 180
           +H + + D  L  L  +    +L++R++PGLE RCV  D    + +AT+ LI  GH  I 
Sbjct: 121 LHVRFLSDDQLRQLATEQRPFILLDRLVPGLEDRCVTFDHPRASRMATQQLIDAGHRHIA 180

Query: 181 YICSNHTISDAEDRLRGYYDALAESHIPANDRLVTFGEPDESGGEQAMTELLGRGRNFTA 240
            I        +  RL+G+  A+  +HI         G  D   G +    LL      TA
Sbjct: 181 CISGPRDRPSSHLRLQGFEQAMQAAHI--KPVACVEGLYDLESGYRCADLLLQMKTTPTA 238

Query: 241 VACYNDSMAAGAMGVLNDNGVGVPGEVSLIGFDDVLVSRYVRPRLTTIRYPIVTMATQAA 300
           + C N+ MA GA+  +N++ + VP ++SLI +D    + +VRP LT++ +PI  MA  AA
Sbjct: 239 IYCCNEEMAIGALLAINEHRLRVPQDISLICYDSGERAPFVRPALTSVHFPITEMAQYAA 298

Query: 301 ELALALAGKCPTPEVTHVFSPTLVRRHSVST 331
              +       TPEV+  FSP ++ R S+ T
Sbjct: 299 RRLI----DPTTPEVS--FSPIVISRDSIVT 323