Pairwise Alignments

Query, 229 a.a., Beta-fimbriae probable major subunit from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 254 a.a., periplasmic protein (NCBI) from Escherichia coli BW25113

 Score = 90.9 bits (224), Expect = 2e-23
 Identities = 78/251 (31%), Positives = 114/251 (45%), Gaps = 23/251 (9%)

Query: 2   KKLLIATSVIIGLST---SAQAVESTAV-LKLTGVLTNGACIPELSDGGVVDFGTKAVSD 57
           KK L   ++   LS    SA A +ST   L + G  T GAC P ++ GG+VD+G    S 
Sbjct: 4   KKNLTTAAICAALSVAAFSAMATDSTDTELTIIGEYTPGACTPVVTGGGIVDYGKHHNSA 63

Query: 58  LLPTQTN----QLGYKDITLTIQCLAPAKVGWVATDNHGDSATTLT----IDNATFGGQN 109
           L PT  +    QLG K+ TL I C AP  +   + DN   +   L     I+ A     +
Sbjct: 64  LNPTGKSNKLVQLGRKNSTLNITCTAPTLIAVTSKDNRQSTIVALNDTSYIEKAYDTLVD 123

Query: 110 NRIPNYQLGLGTTADGIKIGAYGLSIDANNS---TADG---VKTKMVASNDSNPGV--WA 161
            +      GLG+  +G KIGA  + ID +N     AD    +   ++ ++  +     W 
Sbjct: 124 MKGTKNAFGLGSAPNGQKIGAASIGIDRSNGGIHAADDTGEIPVDLIQTDHWSAATPTWK 183

Query: 162 LASN-EYVALTNTFPTRTTYSVGDGNG--PVAFTTATFPIRVAAAIQGTDTLAITDNTTL 218
            +SN  + +LT+       YSV       PVA T  TFP+ + AA+     L   +   L
Sbjct: 184 ASSNGAFCSLTSCSAIERGYSVAKTGELTPVAITAVTFPLLIDAAVNDNTILGSDETIKL 243

Query: 219 DGQATFTLVYL 229
           DG  T ++ YL
Sbjct: 244 DGNVTISVQYL 254