Pairwise Alignments

Query, 1169 a.a., Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 586 a.a., DNA or RNA helicases of superfamily II from Enterobacter asburiae PDN3

 Score = 64.7 bits (156), Expect = 2e-14
 Identities = 104/408 (25%), Positives = 165/408 (40%), Gaps = 66/408 (16%)

Query: 444 LRYYQEDAVRAVEQAIVNGQQHILLAMATGTGKTRTAIALMFRLIQSQRFKRVLFLVDRR 503
           LR YQ++AV A        ++   + + TG GK+   IA + RL +     RVL L   +
Sbjct: 5   LRPYQQEAVDATLAWFRKHREPAAIVLPTGAGKS-LVIAELARLARG----RVLVLAHVK 59

Query: 504 SLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMP 563
            L  Q    +    +  D F +     GL  K  E   K+   +VQS+ +        + 
Sbjct: 60  ELVAQNHAKYCALGLEADIFAA-----GLKRK--ESHGKVVFGSVQSVARNL-----DLF 107

Query: 564 VGRYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVK-----IALTA 618
              +  ++VDE HR  I D + ++              Y++IL H  AV      + LTA
Sbjct: 108 RSEFSLLIVDECHR--ISDDDDSQ--------------YQQILAHLKAVNPHLRLLGLTA 151

Query: 619 TPALHTVDIFGEP-VYRYTYRTAVI-DGYLIDQDPPIQIVTRNAQDGVYLSEGEQVERLN 676
           TP        G+  +YRY Y   V  D   +  D   ++  R      YL+  E+++   
Sbjct: 152 TPFR-----LGKGWIYRYHYHGMVRGDDKALFSDCIYELPLRYMIKHGYLTPPERLDMPV 206

Query: 677 PQGELINDTLADDQDFEVADFNRGLVIPAFNRAVCGELTKYLDPTGQQK--TLVFCVTNA 734
            Q +        +  F  AD N+ L      + +   +   ++     +   ++F  T  
Sbjct: 207 VQYDFSRLQSQSNGLFSEADLNQEL---KKQKRITPHIISQIEEFAATRKGVMIFAATVE 263

Query: 735 HADMVVDELRSAFKKKYPQLEHDAIIKITGDADKDAKKVQSMIVRFNKERLPNIVVTVDL 794
           HA  +   L +           DA + ITG+     +    ++  F  +R    +V V +
Sbjct: 264 HAREITGLLPAG----------DAAL-ITGEMPGPER--DGLVDAFKAQRF-RYLVNVSV 309

Query: 795 LTTGVDIPSICNIVFLRKVKSRILYEQMKGRATRLCPSVGKTSFKIFD 842
           LTTG D P +  I  LR  +S  LY+Q+ GR  RL P  GKT   I D
Sbjct: 310 LTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAP--GKTDCLILD 355