Pairwise Alignments

Query, 1169 a.a., Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 586 a.a., Putative DNA repair helicase RadD from Escherichia coli ECRC101

 Score = 75.9 bits (185), Expect = 9e-18
 Identities = 113/402 (28%), Positives = 176/402 (43%), Gaps = 54/402 (13%)

Query: 444 LRYYQEDAVRAVEQAIVNGQQHILLAMATGTGKTRTAIALMFRLIQSQRFKRVLFLVDRR 503
           LR YQ++AV A        +   ++ + TG GK+   IA + RL +     RVL L   +
Sbjct: 5   LRPYQQEAVDATLNHFRRHKTPAVIVLPTGAGKS-LVIAELARLARG----RVLVLAHVK 59

Query: 504 SLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDSTKIHVATVQSLVKRTLQSDEPMP 563
            L  Q    ++   +  D F +     GL  K  E   K+   +VQS V R L + +   
Sbjct: 60  ELVAQNHAKYQALGLEADIFAA-----GLKRK--ESHGKVVFGSVQS-VARNLDAFQ--- 108

Query: 564 VGRYDCIVVDEAHRGYILDKEQTEGELQFRSQLDYVSAYRRILDHFDAVKIALTATPALH 623
            G +  ++VDE HR  I D E+++ + Q  + L  V+ + R+L         LTATP   
Sbjct: 109 -GEFSLLIVDECHR--IGDDEESQYQ-QILTHLTKVNPHLRLL--------GLTATPFR- 155

Query: 624 TVDIFGEP-VYRYTYRTAVI-DGYLIDQDPPIQIVTRNAQDGVYLSEGEQVERLNPQGEL 681
                G+  +Y++ Y   V  D   + +D   ++  R      YL+  E+++    Q + 
Sbjct: 156 ----LGKGWIYQFHYHGMVRGDEKALFRDCIYELPLRYMIKHGYLTPPERLDMPVVQYDF 211

Query: 682 INDTLADDQDFEVADFNRGLVIPAFNRAVCGELTKYLDPTGQQK-TLVFCVTNAHADMVV 740
                  +  F  AD NR L      R     +++ ++    +K  ++F  T  HA  +V
Sbjct: 212 SRLQAQSNGLFSEADLNREL--KKQQRITPHIISQIMEFAATRKGVMIFAATVEHAKEIV 269

Query: 741 DELRSAFKKKYPQLEHDAIIKITGDADKDAKKVQSMIVRFNKERLPNIVVTVDLLTTGVD 800
             L +           DA + ITGD     + V  +I  F  +R    +V V +LTTG D
Sbjct: 270 GLLPA----------EDAAL-ITGDTPGAERDV--LIEDFKAQRF-RYLVNVAVLTTGFD 315

Query: 801 IPSICNIVFLRKVKSRILYEQMKGRATRLCPSVGKTSFKIFD 842
            P +  I  LR  +S  LY+Q+ GR  RL P  GKT   I D
Sbjct: 316 APHVDLIAILRPTESVSLYQQIVGRGLRLAP--GKTDCLILD 355