Pairwise Alignments

Query, 1169 a.a., Type I restriction-modification system, restriction subunit R (EC 3.1.21.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

Subject, 1142 a.a., Type I site-specific restriction-modification system, R (restriction) subunit and related helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  174 bits (441), Expect = 4e-47
 Identities = 221/820 (26%), Positives = 350/820 (42%), Gaps = 188/820 (22%)

Query: 83  HKLRRIGNLAVHEFHNDLDDAQMCLRLGFRLSVWYYRLVTKDYDFPVPMF---VLPEHGE 139
           H +RRIGN AVH      +D+   L+  FR  V+      ++ +  VP F   ++P   E
Sbjct: 86  HLIRRIGNNAVHNQRIKQEDSIHLLKCLFRFGVFLMAAYGEE-EVRVPDFNDSLIPTGDE 144

Query: 140 -NLYHQEVLTLKQQLERQAQEKVQSQAELEAQQQRLVALNGYIAILEGKQQETEAQTKAR 198
                +E+  L+++L +  QE  + +AEL  ++    A N  + I   KQ E        
Sbjct: 145 LKKSRKEIDLLREKLAQLEQENEKKRAELAEKE----AANDLLRITHEKQHE-------- 192

Query: 199 LAALEAQLAAKDAELAKQTEQERKAYHKEITDQAVKRTLELNEEESRFL-IDAQLRKAGW 257
                            Q +++RKA   E   +A+ R    +E  +R L ID+ L+ AGW
Sbjct: 193 -----------------QLKEQRKAREAEAIPKALPRPP--SEAFTRKLYIDSALKDAGW 233

Query: 258 QADSKTLRFAKGARPEPGVNKAIAEWPTGTDETGKTGFADYVLFI--GLKPIAVVEAKRK 315
                  R  +G   E      ++  P  T+ +G  GF DYVL+   GL P+AVVEAK+ 
Sbjct: 234 T------RLREGYELE----FEVSGMPLSTNPSG-VGFVDYVLWSDNGL-PLAVVEAKKT 281

Query: 316 NTDVSSKLNESYRYSKYFDNGFLRDTLLEHYAPDEVHDAVPEYEISWQDTSGKQRFKIPF 375
             + S   +++  Y+   +  F                              KQR   P 
Sbjct: 282 TANSSKGRHQASLYADCLEKKF------------------------------KQR---PL 308

Query: 376 CYSTNGREYR------AAMKTKSGIWYRDVRHTTNMSKALPEWHRPEELLDMLGSDPQKQ 429
            Y TNG ++       A  +  SG   +D      +  A+      ++L D       K 
Sbjct: 309 IYYTNGFDFYLWDDLFAPDRKVSGFMTKD-----QLELAIRRRKERKDLRDF------KV 357

Query: 430 NQWFAENPGMSELGLRYYQEDAVRAVEQ---AIVNG---QQH--ILLAMATGTGKTRTAI 481
           N      P         YQ +A++ V +    I +G   Q+H   LL MATG+GKTRT+ 
Sbjct: 358 NLAITGRP---------YQTEAIQRVAENLSVIKDGKIKQRHRKSLLIMATGSGKTRTSA 408

Query: 482 ALMFRLIQSQRFKRVLFLVDRRSLGEQALGAFEDTRINGDTFNSIFDIKGLTDKFPEDST 541
           +++  +++    KR+LFL DR +L  QA  AF +   +  + +       LT +   DST
Sbjct: 409 SIVDMMVKCNWAKRILFLADRNALVTQAKNAFTEHLPDLTSID-------LTKEKENDST 461

Query: 542 KIHVATVQSLVKRTLQSDEP----MPVGRYDCIVVDEAHRGYILDKEQTEGELQFRSQLD 597
           ++  +T  +++ +  Q+ +       VG +D I++DEAHR                    
Sbjct: 462 RLVFSTYPTMMNQIDQARDGEGRFYGVGHFDLIIIDEAHRSVY----------------- 504

Query: 598 YVSAYRRILDHFDAVKIALTATPAL----HTVDIF----GEPVYRYTYRTAVIDGYLIDQ 649
               YR I  +FDA  + LTATP      +T ++F      P + Y    AV D +L+  
Sbjct: 505 --QKYRAIFQYFDAFILGLTATPKKDVDHNTYELFEIEDDNPTFAYELDQAVNDSFLV-- 560

Query: 650 DPP--IQIVTRNAQDGVYLSEGEQVERL-------NPQGELINDTLADDQDFEVADFNRG 700
            PP  I +  +  ++G+  SE  + E+L       +P  E   D +   Q ++   FN  
Sbjct: 561 -PPRAISVPLKFMREGIKYSELSEKEKLEYEEKFGDPSNEEAEDGIDKSQLYKWL-FNSN 618

Query: 701 LVIPAFNRAVC-GELTKYLDPTGQQKTLVFCVTNAHADMVVDELRSAFKKKYPQLEHDAI 759
            V    N  +  G      D  G  KT++F   + HA  + +     F K YP+      
Sbjct: 619 TVDQVLNHLMTSGIKVDGGDKIG--KTIIFAKNHKHAVYIEER----FNKNYPEYSG--- 669

Query: 760 IKITGDADKDAKKVQSMIVRF---NKERLPNIVVTVDLLTTGVDIPSICNIVFLRKVKSR 816
            K     D   +K Q ++ RF    +E+ P I ++VD++ TGVD P + N+VF + V+S 
Sbjct: 670 -KFCRVIDNQTEKAQDILERFVLDKEEKEPQIAISVDMMDTGVDAPRVVNLVFFKPVRSV 728

Query: 817 ILYEQMKGRATRLCPSV-----GKTSFKIFDCVDIYSSLE 851
             + QM GR TRL P++      K SF IFD  + +   E
Sbjct: 729 AKFWQMIGRGTRLRPNLFGPGQHKDSFLIFDYCENFEFFE 768