Pairwise Alignments

Query, 609 a.a., ATP-dependent DNA helicase (NCBI) from Escherichia coli BW25113

Subject, 637 a.a., ATP-dependent DNA helicase RecQ from Azospirillum sp. SherDot2

 Score =  516 bits (1328), Expect = e-150
 Identities = 280/616 (45%), Positives = 385/616 (62%), Gaps = 26/616 (4%)

Query: 13  AKQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVS 72
           A + L+  FGY  FR  Q +IID V+ G D LV+MPTGGGKSLCYQIPAL+ +G+TVVVS
Sbjct: 21  ALEALRTVFGYDSFRGQQADIIDHVVRGGDALVLMPTGGGKSLCYQIPALVRDGVTVVVS 80

Query: 73  PLISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLMLDNFL 132
           PLI+LM+DQV  L+  GV AA LNS+    +  EV      G+I L+Y+APERL+   FL
Sbjct: 81  PLIALMRDQVTALRELGVRAAFLNSSLGPAEAREVERAMVQGEIDLVYVAPERLVTPRFL 140

Query: 133 EHLAHWNPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTTRQDI 192
           + L      L A+DEAHC+SQWGHDFRPEY  L  L +R P +P +ALTATAD  TR +I
Sbjct: 141 DLLDRTRLALFALDEAHCVSQWGHDFRPEYLQLSILHERHPMVPRIALTATADVQTRAEI 200

Query: 193 VRLLGLNDPLIQISSFDRPNIRYMLMEKFKPLDQLMRYVQEQRGK-SGIIYCNSRAKVED 251
              LGL D  + +SSFDRPNI Y ++ K     Q++ ++++   + +GI+YC SR KVE+
Sbjct: 201 KDKLGLTDARVFLSSFDRPNITYRVVPKKSERQQMLAFLRDNHPEDAGIVYCMSRNKVEE 260

Query: 252 TAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVVHF 311
            AA L  +G  A  YHAGL    R   Q++F + +  ++VATVAFGMGI+KPNVRFV H 
Sbjct: 261 VAAWLNQQGREALPYHAGLPAETREANQDRFIKSEGLVMVATVAFGMGIDKPNVRFVCHL 320

Query: 312 DIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQL-QDIERHKLNA 370
           D P+++E+YYQETGRAGRDGLPA A + Y  AD+  LR+ LE+   G   + +ER KL A
Sbjct: 321 DPPKSLEAYYQETGRAGRDGLPANAWMAYGMADVVMLRQMLEQSEAGDSHRRVERGKLEA 380

Query: 371 MGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGSTDAQIALSTIGRVNQRF 430
           +  F E   CRR VLLNYF E   EPCGNCD CLDP + +DG+  AQ ALS + R  QR+
Sbjct: 381 LLGFCETSDCRRQVLLNYFNETLPEPCGNCDTCLDPVETWDGTIAAQKALSAVYRTGQRY 440

Query: 431 GMGYVVEVIRGANNQRIRDYGHDKLKVYGMGRDKSHEHWVSVIRQLIHLGLVTQNIAQHS 490
           G G++++V+ G   +++    HD+LK + +G+D +   W SV RQL+  GL+T ++  + 
Sbjct: 441 GAGHLIDVLVGNATEKVVQQNHDQLKTFAVGKDLTKVEWQSVYRQLVATGLLTVDLEGYG 500

Query: 491 ALQLTEAARPVLRGESSLQLAVPRIV---------ALKPKAMQKSFGGN----------- 530
             +LT+A   V++G+  ++L    ++           +  A   S GG+           
Sbjct: 501 GFRLTDAGVAVIKGQRVVKLRKDPVLERRRGVHDALRRHTARGGSVGGSGEGVSRSGARG 560

Query: 531 ----YDRKLFAKLRKLRKSIADESNVPPYVVFNDATLIEMAEQMPITASEMLSVNGVGMR 586
                D  L+  L+  R ++A   +VPPYV+F+D+TL+EM  Q P   +    + GVG R
Sbjct: 561 ALSAADDALWHALKDCRTALAKAQSVPPYVIFHDSTLLEMVAQRPRDHATFAHLPGVGGR 620

Query: 587 KLERFGKPFMALIRAH 602
           KLER+   F+ +IR H
Sbjct: 621 KLERYADAFLEVIRQH 636