Pairwise Alignments

Query, 804 a.a., DNA gyrase subunit B (NCBI) from Escherichia coli BW25113

Subject, 652 a.a., DNA gyrase subunit B from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  637 bits (1642), Expect = 0.0
 Identities = 326/555 (58%), Positives = 412/555 (74%), Gaps = 12/555 (2%)

Query: 1   MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII 60
           ++N Y ++SI+VL+GL+AVRKRP MYIGD     GLHH+V+EVVDN+IDEALAGHC EI 
Sbjct: 9   LANDYSANSIQVLEGLEAVRKRPAMYIGDIGI-KGLHHLVWEVVDNSIDEALAGHCDEIN 67

Query: 61  VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV 120
           VTI+ DNS++V D+GRGIPT  H +EG SA EV+MTVLHAGGKFD ++YKVSGGLHGVGV
Sbjct: 68  VTINEDNSITVSDNGRGIPTDFHQKEGRSALEVVMTVLHAGGKFDKDTYKVSGGLHGVGV 127

Query: 121 SVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVT 180
           S VNALS  L + + R+GKI+ Q Y  GVPQ P+   GET++TGT V+F P    FT  T
Sbjct: 128 SCVNALSTDLHVTVHRKGKIYEQHYNIGVPQYPVREIGETDRTGTTVQFKPDASIFT-AT 186

Query: 181 EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKE------DHFHYEGGIKAFVEYLNKNKT 234
           E++++ +A RLRELSFLN G+ I L+D R+  +      D F  EGG+K FV YL++ + 
Sbjct: 187 EYKFDTIASRLRELSFLNKGIRINLKDLRELNDQGEPLNDSFLSEGGLKEFVTYLDETRE 246

Query: 235 PIHPNIFYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLN 294
            + P   +  +EK+G+ VE+ALQ+N  + ENI+ + NNI   +GGTH+AGFR A+TRTL 
Sbjct: 247 NLIPEPIHVESEKNGVPVEIALQYNTSYSENIFSYVNNINTIEGGTHVAGFRRALTRTLK 306

Query: 295 AYMDKEGYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMN 354
           AY +K G   K KV   GDD REGL AV+SVKV +P+F  QTK KL +SEV  AV+  + 
Sbjct: 307 AYAEKSGMLDKVKVDIAGDDFREGLTAVISVKVAEPQFEGQTKTKLGNSEVSGAVDTAVG 366

Query: 355 ELLAEYLLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERD 414
           E+L +YL ENP +A+ +V K+I AA+AR AAR+AREM +RK  L    LPGKLADC + +
Sbjct: 367 EMLNQYLEENPKEARTIVNKVIIAAQARHAARKAREMVQRKNVLSSTSLPGKLADCSDNN 426

Query: 415 PALSELYLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITAL 474
           P   E+YLVEGDSAGGSAKQGR+RK QAILPL+GKILNVEKA+  ++  S E+  +ITAL
Sbjct: 427 PENCEIYLVEGDSAGGSAKQGRDRKFQAILPLRGKILNVEKAQEHRIYESDEIKNMITAL 486

Query: 475 GCGIGRDE----YNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIA 530
           G   G  E     N DKLRYH IIIMTDADVDGSHIRTL+LTFF+R M E++E+G+VYIA
Sbjct: 487 GVSFGTQEDEKALNMDKLRYHKIIIMTDADVDGSHIRTLILTFFFRYMKELIEKGYVYIA 546

Query: 531 QPPLYKVKKGKQEQY 545
            PPLY VKKGK+E+Y
Sbjct: 547 LPPLYLVKKGKEERY 561



 Score = 94.4 bits (233), Expect = 2e-23
 Identities = 49/101 (48%), Positives = 65/101 (64%), Gaps = 4/101 (3%)

Query: 707 IERGERRQPVASFEQALDWLV---KESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRML 763
           +++G+  +   S +  +D +    K     + +QRYKGLGEMNPEQLW TTMDP SR + 
Sbjct: 553 VKKGKEERYCWSEQDRIDAIAEIGKGREESVGVQRYKGLGEMNPEQLWNTTMDPTSRSLK 612

Query: 764 RVTVKDAIAADQLFTTLMGDAVEPRRAFIEENALKAANIDI 804
           RV ++ A  AD LF+ LMGD V PRR FIE NA K A +D+
Sbjct: 613 RVDIESAAEADHLFSMLMGDEVAPRRDFIERNA-KYARVDV 652