Pairwise Alignments

Query, 804 a.a., DNA gyrase subunit B (NCBI) from Escherichia coli BW25113

Subject, 804 a.a., DNA topoisomerase (ATP-hydrolyzing) subunit B from Serratia liquefaciens MT49

 Score = 1420 bits (3676), Expect = 0.0
 Identities = 705/804 (87%), Positives = 750/804 (93%)

Query: 1   MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII 60
           MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHC +I 
Sbjct: 1   MSNSYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCSDIQ 60

Query: 61  VTIHADNSVSVQDDGRGIPTGIHPEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV 120
           VTIHADNSVSVQDDGRGIPTGIH EEGVSAA+VIMTVLHAGGKFDDNSYKVSGGLHGVGV
Sbjct: 61  VTIHADNSVSVQDDGRGIPTGIHEEEGVSAAQVIMTVLHAGGKFDDNSYKVSGGLHGVGV 120

Query: 121 SVVNALSQKLELVIQREGKIHRQIYEHGVPQAPLAVTGETEKTGTMVRFWPSLETFTNVT 180
           SVVNALS+KLELVI+REGK+H Q Y  G P +PL V GET++TGT VRFWPS ETFTN T
Sbjct: 121 SVVNALSEKLELVIRREGKVHEQTYAMGEPLSPLKVVGETDQTGTTVRFWPSYETFTNNT 180

Query: 181 EFEYEILAKRLRELSFLNSGVSIRLRDKRDGKEDHFHYEGGIKAFVEYLNKNKTPIHPNI 240
           EFEY+ILAKRLRELSFLNSGVSIRL+DKR  KEDHFHYEGGIKAFVEYLNKNKTPIHPN+
Sbjct: 181 EFEYDILAKRLRELSFLNSGVSIRLKDKRTDKEDHFHYEGGIKAFVEYLNKNKTPIHPNV 240

Query: 241 FYFSTEKDGIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLAGFRAAMTRTLNAYMDKE 300
           FYFST KD IGVEVALQWNDGFQENIYCFTNNIPQRDGGTHL GFR AMTRTLN+YMDKE
Sbjct: 241 FYFSTVKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDKE 300

Query: 301 GYSKKAKVSATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKSAVEQQMNELLAEY 360
           GYSKKAK+SATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVK+AVE  MNE L +Y
Sbjct: 301 GYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVDY 360

Query: 361 LLENPTDAKIVVGKIIDAARAREAARRAREMTRRKGALDLAGLPGKLADCQERDPALSEL 420
           L+ENP DAKIVVGKIIDAARAREAAR+AREMTRRKGALDLAGLPGKLADCQERDPALSEL
Sbjct: 361 LMENPGDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL 420

Query: 421 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR 480
           YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
Sbjct: 421 YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR 480

Query: 481 DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIVERGHVYIAQPPLYKVKKG 540
           DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEI+ERGHV+IAQPPLYKVKKG
Sbjct: 481 DEYNPDKLRYHSIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG 540

Query: 541 KQEQYIKDDEAMDQYQISIALDGATLHTNASAPALAGEALEKLVSEYNATQKMINRMERR 600
           KQEQYIKDDEAMDQYQI+IA+DGATLHTNASAPAL GE LEKLV+E+ + QK+I RMERR
Sbjct: 541 KQEQYIKDDEAMDQYQIAIAMDGATLHTNASAPALGGEQLEKLVAEHYSVQKLIGRMERR 600

Query: 601 YPKAMLKELIYQPTLTEADLSDEQTVTRWVNALVSELNDKEQHGSQWKFDVHTNAEQNLF 660
           YP+A+L  LIYQPTL E DLSD+  V  W+++LV  LNDKEQHGS +   +  N E+ +F
Sbjct: 601 YPRALLNNLIYQPTLQEEDLSDQSKVKTWIDSLVKLLNDKEQHGSSYDSVIFENRERQMF 660

Query: 661 EPIVRVRTHGVDTDYPLDHEFITGGEYRRICTLGEKLRGLLEEDAFIERGERRQPVASFE 720
           EP++R+RTHGVDTDY LD +FI GGEYR+IC LGEKLRGL+EE AFIERGERRQP+ SFE
Sbjct: 661 EPVLRIRTHGVDTDYALDFDFIHGGEYRKICVLGEKLRGLIEEGAFIERGERRQPIESFE 720

Query: 721 QALDWLVKESRRGLSIQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL 780
           QAL+WLVKESRRGL++QRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL
Sbjct: 721 QALEWLVKESRRGLAVQRYKGLGEMNPEQLWETTMDPESRRMLRVTVKDAIAADQLFTTL 780

Query: 781 MGDAVEPRRAFIEENALKAANIDI 804
           MGDAVEPRRAFIEENALKAANIDI
Sbjct: 781 MGDAVEPRRAFIEENALKAANIDI 804