Pairwise Alignments

Query, 355 a.a., predicted inner membrane protein (NCBI) from Escherichia coli BW25113

Subject, 445 a.a., lipopolysaccharide biosynthesis protein from Serratia liquefaciens MT49

 Score =  561 bits (1446), Expect = e-164
 Identities = 260/350 (74%), Positives = 313/350 (89%)

Query: 6   IKHWFADGAFRTIIRNSAWLGSSNVVSALLGLLALSCAGKGMTPAMFGVLVIVQSYAKSI 65
           +KHWF+DGAFR+I+RN+A+LGS +V SALLGLLALSCAGKGM+P MFGVLV++Q+Y K++
Sbjct: 1   MKHWFSDGAFRSILRNAAYLGSGSVASALLGLLALSCAGKGMSPEMFGVLVVIQAYTKAV 60

Query: 66  SDFIKFQTWQLVVQYGTPALTNNNPQQFRNVVSFSFSLDIVSGAVAIVGGIALLPFLSHS 125
           SDFIKFQTWQ VVQ+GTPAL   N Q+FR+V+SFSF LDI SG +A++GG+ LLPFLSH+
Sbjct: 61  SDFIKFQTWQFVVQFGTPALERQNIQRFRDVISFSFGLDIASGTIAVLGGMLLLPFLSHA 120

Query: 126 LGLDDQSFWLAALYCTLIPSMASSTPTGILRAVDRFDLIAVQQATKPFLRAAGSVVAWYF 185
           LGLD +SFWLA LYCTLIPSM SSTPTGILRA DRFDLIAVQQA KPFL+A GSV+++YF
Sbjct: 121 LGLDTESFWLAILYCTLIPSMTSSTPTGILRAFDRFDLIAVQQAIKPFLQAVGSVLSYYF 180

Query: 186 DFGFAGFVIAWYVSNLVGGTMYWWFAARELRRRNIHNAFKLNLFESARYIKGAWSFVWST 245
           D+GF GF++ WY SNL+GGT++WWFAAREL RR+IHNA K  LF++AR I+GAW+FVW+T
Sbjct: 181 DWGFPGFIVTWYASNLIGGTLFWWFAARELHRRDIHNALKPRLFKTARRIEGAWNFVWTT 240

Query: 246 NIAHSIWSARNSCSTVLVGIVLGPAAAGLFKIAMTFFDAAGTPAGLLGKSFYPEVMRLDP 305
           N AH+IW+ RNSCSTVLVG+VLGPAAAGLFKIAMTFFDA GTPA LL KSFYPE+MRLDP
Sbjct: 241 NFAHTIWATRNSCSTVLVGVVLGPAAAGLFKIAMTFFDATGTPAKLLEKSFYPEIMRLDP 300

Query: 306 RTTRPWLLGVKSGLLAGGIGILVALAVLIVGKPLISLVFGVKYLEAYDLI 355
           RT++PW+LG++S LLAGGIG+ VAL V++VGKPLIS VFG +YL+AYDLI
Sbjct: 301 RTSKPWMLGLRSALLAGGIGLAVALLVIVVGKPLISFVFGQQYLQAYDLI 350