Pairwise Alignments

Query, 410 a.a., probable nadAB transcriptional regulator (VIMSS) from Escherichia coli BW25113

Subject, 189 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

 Score = 45.1 bits (105), Expect = 2e-09
 Identities = 37/142 (26%), Positives = 60/142 (42%), Gaps = 5/142 (3%)

Query: 228 PFFVRTVAILGGESSGKSTLVNKLANIFNTTSAWEYGRDYVFSHLGGDEIALQYSDYDKI 287
           P  ++ + + G ESSGKS L   +   F      EY R ++            Y+D   I
Sbjct: 4   PQAMKVLVLCGPESSGKSWLSGVIQAHFGGLVVGEYVRHFIDQQCRD----TCYADIPAI 59

Query: 288 ALGHAQYIDFAVKYANKVAFIDTDFVTTQAFCKKYEGREHPFVQALIDEYRFDLVILLE- 346
           A G   + D A + A  +  +DT  ++   +     G    +++  +   R+DL +LL  
Sbjct: 60  ARGQLAWEDRAREQAPPLLILDTHLLSNMLWSHALFGDCPTWLEEALLARRYDLHLLLSP 119

Query: 347 NNTPWVADGLRSLGSSVDRKEF 368
               W+ADG R      DR+ F
Sbjct: 120 QGVDWIADGQRCQPDLSDRQRF 141