Pairwise Alignments

Query, 460 a.a., predicted repair protein (NCBI) from Escherichia coli BW25113

Subject, 454 a.a., DNA repair protein RadA from Ralstonia solanacearum PSI07

 Score =  506 bits (1304), Expect = e-148
 Identities = 258/454 (56%), Positives = 336/454 (74%), Gaps = 8/454 (1%)

Query: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGV 60
           MAK+ K  + C ECG   P+W GQC  C  WNT+ E        VA+    + +   A  
Sbjct: 1   MAKS-KMVYTCTECGGTSPKWAGQCPHCQQWNTLVE-------SVAQPTAGARFQSLAAN 52

Query: 61  AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120
           A V+KL+DI   ++PRFS+G  EFDRVLGGG+V G  +LIGG+PG GKSTLLLQ L  LA
Sbjct: 53  ATVRKLADIDAVDVPRFSSGIDEFDRVLGGGLVGGGVVLIGGDPGIGKSTLLLQALSNLA 112

Query: 121 QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ 180
              + LYV+GEES  Q+A+RA RLG+ + NL +L+E  +E+I    E E+P+++VIDSIQ
Sbjct: 113 ASRRVLYVSGEESGAQIALRARRLGIESPNLALLAEIQLERIQATIEAEKPEVVVIDSIQ 172

Query: 181 VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240
            ++   + S+PGSVAQVRE AA LTR AK   V  ++VGHVTK+G+LAGP+VLEH +D  
Sbjct: 173 TLYSEALTSAPGSVAQVRECAAQLTRVAKRLDVTTILVGHVTKEGALAGPRVLEHIVDTV 232

Query: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV 300
           +  +GD  S +R +R+ KNRFGAVNELGVFAMTE+GLR V+NPSA+FLS+ ++   GS V
Sbjct: 233 LYFEGDTHSAYRLVRAFKNRFGAVNELGVFAMTERGLRGVANPSALFLSQHEQTVPGSCV 292

Query: 301 MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV 360
           +V  EGTRPLLVEIQALVD + + NPRR+AVGLEQNRLA+LLAVLHRH G+   DQDVF+
Sbjct: 293 LVTQEGTRPLLVEIQALVDAAGVPNPRRLAVGLEQNRLAMLLAVLHRHAGIACFDQDVFL 352

Query: 361 NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 420
           N VGGVK+TE +ADLA+LLA+ SS+R++PLP+ LVVFGE+GLAGEIRP P GQER+ EAA
Sbjct: 353 NAVGGVKITEPAADLAVLLAIHSSMRNKPLPRGLVVFGEIGLAGEIRPTPRGQERLKEAA 412

Query: 421 KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDAL 454
           K GF  A++P +N PK+  +G+Q+  V+++  A+
Sbjct: 413 KLGFSIAVIPKSNAPKQPVDGLQVIAVERIEQAI 446