Pairwise Alignments

Query, 460 a.a., predicted repair protein (NCBI) from Escherichia coli BW25113

Subject, 460 a.a., DNA repair protein RadA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  881 bits (2277), Expect = 0.0
 Identities = 449/460 (97%), Positives = 456/460 (99%)

Query: 1   MAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPMVARNERLSGYAGSAGV 60
           +AKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASP VARNERLSGYAGSAGV
Sbjct: 1   VAKAPKRAFVCNECGADYPRWQGQCSACHAWNTITEVRLAASPTVARNERLSGYAGSAGV 60

Query: 61  AKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120
           +KVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA
Sbjct: 61  SKVQKLSDISLEELPRFSTGFKEFDRVLGGGVVPGSAILIGGNPGAGKSTLLLQTLCKLA 120

Query: 121 QQMKTLYVTGEESLQQVAMRAHRLGLPTDNLNMLSETSIEQICLIAEEEQPKLMVIDSIQ 180
           +QMKTLYVTGEESLQQVAMRAHRLGLPT NLNMLSETSIEQICLIAEEEQPKLMVIDSIQ
Sbjct: 121 EQMKTLYVTGEESLQQVAMRAHRLGLPTANLNMLSETSIEQICLIAEEEQPKLMVIDSIQ 180

Query: 181 VMHMADVQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240
           VMHMAD+QSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS
Sbjct: 181 VMHMADIQSSPGSVAQVRETAAYLTRFAKTRGVAIVMVGHVTKDGSLAGPKVLEHCIDCS 240

Query: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV 300
           VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV
Sbjct: 241 VLLDGDADSRFRTLRSHKNRFGAVNELGVFAMTEQGLREVSNPSAIFLSRGDEVTSGSSV 300

Query: 301 MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMADQDVFV 360
           MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQM+DQDVFV
Sbjct: 301 MVVWEGTRPLLVEIQALVDHSMMANPRRVAVGLEQNRLAILLAVLHRHGGLQMSDQDVFV 360

Query: 361 NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 420
           NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA
Sbjct: 361 NVVGGVKVTETSADLALLLAMVSSLRDRPLPQDLVVFGEVGLAGEIRPVPSGQERISEAA 420

Query: 421 KHGFRRAIVPAANVPKKAPEGMQIFGVKKLSDALSVFDDL 460
           KHGFRRAIVPAANVPKK PEGM +FGVKKL+DALSVFDDL
Sbjct: 421 KHGFRRAIVPAANVPKKPPEGMLVFGVKKLADALSVFDDL 460