Pairwise Alignments

Query, 300 a.a., minor component of type 1 fimbriae (NCBI) from Escherichia coli BW25113

Subject, 304 a.a., predicted fimbrial-like adhesin protein (NCBI) from Escherichia coli BW25113

 Score =  273 bits (698), Expect = 4e-78
 Identities = 142/297 (47%), Positives = 195/297 (65%), Gaps = 5/297 (1%)

Query: 7   LFAVLLMGWSVNAWSFACKTANGTAIPIGGGSANVYVNLAPVVNVGQNLVVDLSTQIFCH 66
           LF + L+  +   ++F+C    G++I  G G+ +VYVNL PV+  GQNLVVDLS  I C 
Sbjct: 10  LFGIYLLLMAGKVFAFSCNVDGGSSI--GAGTTSVYVNLDPVIQPGQNLVVDLSQHISCW 67

Query: 67  NDYPETI-TDYVTLQRGSAYGGVLSNFSGTVKYSGSSYPFPTTSETPRVVYNSRTDKPWP 125
           NDY     TD++ L +GSA+ G L ++ G++ ++  +YPFP T+ T  +    +T  P P
Sbjct: 68  NDYGGWYDTDHINLVQGSAFAGSLQSYKGSLYWNNVTYPFPLTTNTNVLDIGDKTPMPLP 127

Query: 126 VALYLTPVSSAGGVAIKAGSLIAVLILRQTNNYNSDDFQ-FVWNIYANNDVVVPTGGCDV 184
           + LY+TPV +AGGV IKAG +IA + + +     S + + F WNI +NN+VV+PTGGC V
Sbjct: 128 LKLYITPVGAAGGVVIKAGEVIARIHMYKIATLGSGNPRNFTWNIISNNNVVMPTGGCTV 187

Query: 185 SARDVTVTLPDYPGSVPIPLTVYCAKSQNLGYYLSGTTADAGNSIFTNTA-SFSPAQGVG 243
            +R+VTV LPD+PGS  IPL VYC+  Q L +YLSG T D+   +F NTA   + A GVG
Sbjct: 188 DSRNVTVDLPDFPGSAEIPLGVYCSSEQKLSFYLSGATTDSSRQVFANTAPDATKASGVG 247

Query: 244 VQLTRNGTIIPANNTVSLGAVGTSAVSLGLTANYARTGGQVTAGNVQSIIGVTFVYQ 300
           V L RNG I+     VSLG V  S V LGL+A Y +TG +V+AG VQS+IGVTF+Y+
Sbjct: 248 VTLMRNGKILATGENVSLGTVNKSKVPLGLSATYGQTGNKVSAGTVQSVIGVTFIYE 304